Pp3c2_2600V3.1


Description : No annotation


Gene families : OG0007573 (Archaeplastida) Phylogenetic Tree(s): OG0007573_tree ,
OG_05_0005631 (LandPlants) Phylogenetic Tree(s): OG_05_0005631_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_2600V3.1
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
Pp3c11_25370V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c18_22320V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.03 Archaeplastida
Pp3c19_6830V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.06 Archaeplastida
Pp3c1_18030V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c20_23190V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.04 Archaeplastida
Pp3c21_3520V3.1 No alias target of AVRB operation1 0.04 Archaeplastida
Pp3c21_3580V3.1 No alias target of AVRB operation1 0.05 Archaeplastida
Pp3c2_24770V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.03 Archaeplastida
Pp3c2_2580V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.03 Archaeplastida
Pp3c2_2610V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.03 Archaeplastida
Pp3c3_1680V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.03 Archaeplastida
Pp3c7_1020V3.1 No alias target of AVRB operation1 0.04 Archaeplastida
Pp3c7_6200V3.1 No alias No annotation 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
BP GO:0032200 telomere organization IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0060249 anatomical structure homeostasis IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!