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  5. Pp3c2_28182V3.1

Pp3c2_28182V3.1


Description : FtsJ-like methyltransferase family protein


Gene families : OG0002407 (Archaeplastida) Phylogenetic Tree(s): OG0002407_tree ,
OG_05_0002081 (LandPlants) Phylogenetic Tree(s): OG_05_0002081_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_28182V3.1
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
AT4G25730 No alias FtsJ-like methyltransferase family protein 0.11 Archaeplastida
Cre12.g529500 No alias No description available 0.12 Archaeplastida
GSVIVT01023801001 No alias No description available 0.08 Archaeplastida
LOC_Os05g49230.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10429557g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp8g14990.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Smo141188 No alias No description available 0.04 Archaeplastida
Smo404107 No alias No description available 0.04 Archaeplastida
Smo78506 No alias No description available 0.04 Archaeplastida
Solyc11g020810.2.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e026556_P001 No alias no hits & (original description: none) 0.11 Archaeplastida
Zm00001e032456_P001 No alias no hits & (original description: none) 0.13 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!