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  5. Pp3c2_30770V3.1

Pp3c2_30770V3.1


Description : scarecrow-like 5


Gene families : OG0001538 (Archaeplastida) Phylogenetic Tree(s): OG0001538_tree ,
OG_05_0000997 (LandPlants) Phylogenetic Tree(s): OG_05_0000997_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_30770V3.1
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00043p00136400 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRAS... 0.03 Archaeplastida
AMTR_s00088p00161000 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRAS... 0.03 Archaeplastida
AMTR_s00186p00018500 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRAS... 0.04 Archaeplastida
AT1G50600 SCL5 scarecrow-like 5 0.03 Archaeplastida
GSVIVT01030047001 No alias RNA biosynthesis.transcriptional activation.GRAS... 0.02 Archaeplastida
Gb_02264 No alias transcription factor (GRAS) 0.03 Archaeplastida
Gb_30494 No alias transcription factor (GRAS) 0.01 Archaeplastida
Gb_31684 No alias transcription factor (GRAS) 0.02 Archaeplastida
Gb_40278 No alias transcription factor (GRAS) 0.03 Archaeplastida
LOC_Os07g36170.2 No alias transcription factor (GRAS) 0.04 Archaeplastida
LOC_Os07g39470.1 No alias transcription factor (GRAS) 0.03 Archaeplastida
Solyc04g014830.3.1 No alias transcription factor (GRAS) 0.02 Archaeplastida
Solyc07g047950.1.1 No alias transcription factor (GRAS) 0.03 Archaeplastida
Solyc07g063940.2.1 No alias transcription factor (GRAS) 0.03 Archaeplastida
Solyc07g065270.1.1 No alias transcription factor (GRAS) 0.03 Archaeplastida
Solyc11g012510.3.1 No alias transcription factor (GRAS) 0.02 Archaeplastida
Zm00001e002780_P001 No alias transcription factor (GRAS) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!