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  5. Pp3c2_31720V3.1

Pp3c2_31720V3.1


Description : LisH dimerisation motif;WD40/YVTN repeat-like-containing domain


Gene families : OG0000691 (Archaeplastida) Phylogenetic Tree(s): OG0000691_tree ,
OG_05_0000885 (LandPlants) Phylogenetic Tree(s): OG_05_0000885_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_31720V3.1
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00122p00094620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional repression.LUG... 0.02 Archaeplastida
Pp3c1_3700V3.1 No alias LisH dimerisation motif;WD40/YVTN repeat-like-containing domain 0.04 Archaeplastida
Pp3c2_31700V3.1 No alias LisH dimerisation motif;WD40/YVTN repeat-like-containing domain 0.03 Archaeplastida
Smo410492 No alias RNA biosynthesis.transcriptional repression.LUG... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 130 166
IPR001680 WD40_repeat 50 86
IPR001680 WD40_repeat 218 253
IPR001680 WD40_repeat 7 42
No external refs found!