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  5. Pp3c2_32900V3.1

Pp3c2_32900V3.1


Description : C2H2 and C2HC zinc fingers superfamily protein


Gene families : OG0000055 (Archaeplastida) Phylogenetic Tree(s): OG0000055_tree ,
OG_05_0000021 (LandPlants) Phylogenetic Tree(s): OG_05_0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_32900V3.1
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00082p00184630 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.01 Archaeplastida
AMTR_s00124p00105750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
AT5G43540 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
AT5G48890 No alias C2H2-like zinc finger protein 0.02 Archaeplastida
LOC_Os01g32920.1 No alias C2H2 zinc finger transcription factor 0.01 Archaeplastida
LOC_Os05g20930.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_126188g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_424g0010 No alias C2H2 zinc finger transcription factor 0.01 Archaeplastida
MA_48488g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_57501g0010 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
MA_57615g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Pp3c11_13030V3.1 No alias zinc-finger protein 10 0.04 Archaeplastida
Pp3c26_13140V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
Solyc03g117070.1.1 No alias C2H2 zinc finger transcription factor 0.01 Archaeplastida
Solyc05g009180.1.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Solyc10g049870.1.1 No alias C2H2 zinc finger transcription factor 0.08 Archaeplastida
Zm00001e009853_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!