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AT4G33440


Description : Pectin lyase-like superfamily protein


Gene families : OG0000349 (Archaeplastida) Phylogenetic Tree(s): OG0000349_tree ,
OG_05_0000329 (LandPlants) Phylogenetic Tree(s): OG_05_0000329_tree ,
OG_06_0011543 (SeedPlants) Phylogenetic Tree(s): OG_06_0011543_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G33440
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
AT2G23900 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity ISS Interproscan
BP GO:0005975 carbohydrate metabolic process ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0003720 telomerase activity IEP Neighborhood
MF GO:0003721 telomerase RNA reverse transcriptase activity IEP Neighborhood
MF GO:0003964 RNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0003983 UTP:glucose-1-phosphate uridylyltransferase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0004683 calmodulin-dependent protein kinase activity IEP Neighborhood
MF GO:0004693 cyclin-dependent protein serine/threonine kinase activity IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0006278 RNA-dependent DNA biosynthetic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0006997 nucleus organization IEP Neighborhood
BP GO:0007000 nucleolus organization IEP Neighborhood
BP GO:0007004 telomere maintenance via telomerase IEP Neighborhood
BP GO:0007166 cell surface receptor signaling pathway IEP Neighborhood
BP GO:0007167 enzyme linked receptor protein signaling pathway IEP Neighborhood
BP GO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEP Neighborhood
BP GO:0010833 telomere maintenance via telomere lengthening IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
CC GO:0016324 apical plasma membrane IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
CC GO:0042995 cell projection IEP Neighborhood
CC GO:0045177 apical part of cell IEP Neighborhood
BP GO:0048235 pollen sperm cell differentiation IEP Neighborhood
BP GO:0048869 cellular developmental process IEP Neighborhood
BP GO:0050000 chromosome localization IEP Neighborhood
BP GO:0051026 chiasma assembly IEP Neighborhood
MF GO:0051748 UTP-monosaccharide-1-phosphate uridylyltransferase activity IEP Neighborhood
MF GO:0070569 uridylyltransferase activity IEP Neighborhood
BP GO:0071897 DNA biosynthetic process IEP Neighborhood
CC GO:0090406 pollen tube IEP Neighborhood
MF GO:0097472 cyclin-dependent protein kinase activity IEP Neighborhood
CC GO:0098590 plasma membrane region IEP Neighborhood
CC GO:0120025 plasma membrane bounded cell projection IEP Neighborhood
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 168 448
No external refs found!