1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c2_34070V3.1

Pp3c2_34070V3.1


Description : pleiotropic drug resistance 3


Gene families : OG0000050 (Archaeplastida) Phylogenetic Tree(s): OG0000050_tree ,
OG_05_0000049 (LandPlants) Phylogenetic Tree(s): OG_05_0000049_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_34070V3.1
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000057.108 No alias ABC transporter G family member 35 OS=Arabidopsis thaliana 0.01 Archaeplastida
Cre04.g224500 No alias Solute transport.primary active transport.ABC... 0.01 Archaeplastida
Cre11.g467597 No alias Solute transport.primary active transport.ABC... 0.01 Archaeplastida
Cre12.g540650 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
GSVIVT01016993001 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
GSVIVT01016998001 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
GSVIVT01017202001 No alias Solute transport.primary active transport.ABC... 0.01 Archaeplastida
GSVIVT01035715001 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
LOC_Os09g16330.2 No alias subfamily ABCG transporter 0.02 Archaeplastida
MA_160238g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_17319g0020 No alias subfamily ABCG transporter 0.02 Archaeplastida
Mp2g03890.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Pp3c19_17390V3.1 No alias pleiotropic drug resistance 1 0.01 Archaeplastida
Zm00001e026148_P001 No alias subfamily ABCG transporter 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0016042 lipid catabolic process IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0030976 thiamine pyrophosphate binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
MF GO:0070569 uridylyltransferase activity IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR013581 PDR_assoc 691 752
IPR013525 ABC_2_trans 1124 1337
IPR013525 ABC_2_trans 475 686
IPR029481 ABC_trans_N 53 113
IPR003439 ABC_transporter-like 138 320
IPR003439 ABC_transporter-like 827 979
No external refs found!