Description : histone deacetylase 3
Gene families : OG0001808 (Archaeplastida) Phylogenetic Tree(s): OG0001808_tree ,
OG_05_0001598 (LandPlants) Phylogenetic Tree(s): OG_05_0001598_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Pp3c2_6080V3.1 | |
Cluster | HCCA: Cluster_244 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT2G27840 | HDA13, HDT04, HDT4 | histone deacetylase-related / HD-related | 0.06 | Archaeplastida | |
AT3G44750 | HDA3, ATHD2A, HDT1, HD2A | histone deacetylase 3 | 0.1 | Archaeplastida | |
Cpa|evm.model.tig00000388.65 | No alias | Protein modification.protein folding and quality... | 0.07 | Archaeplastida | |
GSVIVT01031404001 | No alias | Chromatin organisation.histone modifications.histone... | 0.02 | Archaeplastida | |
LOC_Os05g51830.1 | No alias | histone deacetylase (HDT/HD2) | 0.02 | Archaeplastida | |
MA_118767g0010 | No alias | histone deacetylase (HDT/HD2) | 0.02 | Archaeplastida | |
MA_3905g0020 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
MA_601245g0010 | No alias | histone deacetylase (HDT/HD2) | 0.04 | Archaeplastida | |
Mp5g10240.1 | No alias | histone deacetylase (HDT/HD2) | 0.02 | Archaeplastida | |
Smo428242 | No alias | Chromatin organisation.histone modifications.histone... | 0.03 | Archaeplastida | |
Solyc09g009030.4.1 | No alias | histone deacetylase (HDT/HD2) | 0.05 | Archaeplastida | |
Solyc11g066840.3.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
Zm00001e018891_P001 | No alias | histone deacetylase (HDT/HD2) | 0.03 | Archaeplastida | |
Zm00001e027707_P004 | No alias | histone deacetylase (HDT/HD2) | 0.04 | Archaeplastida | |
Zm00001e028512_P001 | No alias | histone deacetylase (HDT/HD2) | 0.04 | Archaeplastida | |
Zm00001e032246_P002 | No alias | histone deacetylase (HDT/HD2) | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000105 | histidine biosynthetic process | IEP | Neighborhood |
CC | GO:0005730 | nucleolus | IEP | Neighborhood |
BP | GO:0006364 | rRNA processing | IEP | Neighborhood |
BP | GO:0006547 | histidine metabolic process | IEP | Neighborhood |
MF | GO:0008168 | methyltransferase activity | IEP | Neighborhood |
BP | GO:0008652 | cellular amino acid biosynthetic process | IEP | Neighborhood |
BP | GO:0009072 | aromatic amino acid family metabolic process | IEP | Neighborhood |
BP | GO:0009073 | aromatic amino acid family biosynthetic process | IEP | Neighborhood |
BP | GO:0016072 | rRNA metabolic process | IEP | Neighborhood |
MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Neighborhood |
BP | GO:0034470 | ncRNA processing | IEP | Neighborhood |
BP | GO:0052803 | imidazole-containing compound metabolic process | IEP | Neighborhood |
BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | Neighborhood |
No InterPro domains available for this sequence
No external refs found! |