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  5. Pp3c2_9900V3.1

Pp3c2_9900V3.1


Description : bifunctional nuclease in basal defense response 1


Gene families : OG0001711 (Archaeplastida) Phylogenetic Tree(s): OG0001711_tree ,
OG_05_0001348 (LandPlants) Phylogenetic Tree(s): OG_05_0001348_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c2_9900V3.1
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00014p00133450 evm_27.TU.AmTr_v1... Bifunctional nuclease 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G19660 No alias Wound-responsive family protein 0.03 Archaeplastida
AT1G75380 BBD1, ATBBD1 bifunctional nuclease in basal defense response 1 0.03 Archaeplastida
Cre16.g688302 No alias No description available 0.01 Archaeplastida
GSVIVT01009760001 No alias Bifunctional nuclease 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_36898 No alias Bifunctional nuclease 2 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os01g50622.1 No alias Bifunctional nuclease 1 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os08g26870.1 No alias Bifunctional nuclease 2 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Pp3c20_10270V3.1 No alias bifunctional nuclease in basal defense response 1 0.03 Archaeplastida
Solyc04g080700.4.1 No alias Bifunctional nuclease 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e002828_P004 No alias Bifunctional nuclease 2 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e018013_P001 No alias Bifunctional nuclease 1 OS=Oryza sativa subsp. indica... 0.02 Archaeplastida
Zm00001e022156_P001 No alias Bifunctional nuclease 2 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008716 D-alanine-D-alanine ligase activity IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009538 photosystem I reaction center IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016881 acid-amino acid ligase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!