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  5. Pp3c3_12000V3.1

Pp3c3_12000V3.1


Description : ATP-dependent caseinolytic (Clp) protease/crotonase family protein


Gene families : OG0000861 (Archaeplastida) Phylogenetic Tree(s): OG0000861_tree ,
OG_05_0006224 (LandPlants) Phylogenetic Tree(s): OG_05_0006224_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c3_12000V3.1
Cluster HCCA: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00194810 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.04 Archaeplastida
AMTR_s00164p00068000 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.03 Archaeplastida
AT1G09130 No alias ATP-dependent caseinolytic (Clp) protease/crotonase... 0.03 Archaeplastida
AT1G49970 CLPR1, SVR2, NCLPP5 CLP protease proteolytic subunit 1 0.07 Archaeplastida
AT4G17040 CLPR4 CLP protease R subunit 4 0.07 Archaeplastida
Cpa|evm.model.tig00020952.49 No alias Protein degradation.peptidase families.serine-type... 0.04 Archaeplastida
Cre03.g204350 No alias Protein degradation.peptidase families.serine-type... 0.03 Archaeplastida
Cre14.g619100 No alias Protein degradation.peptidase families.serine-type... 0.04 Archaeplastida
GSVIVT01031146001 No alias Protein degradation.peptidase families.serine-type... 0.05 Archaeplastida
Gb_12676 No alias non-proteolytic core component ClpR of chloroplast... 0.04 Archaeplastida
Gb_40312 No alias non-proteolytic core component ClpR of chloroplast... 0.05 Archaeplastida
LOC_Os03g22430.1 No alias non-proteolytic core component ClpR of chloroplast... 0.03 Archaeplastida
LOC_Os05g51450.1 No alias non-proteolytic core component ClpR of chloroplast... 0.03 Archaeplastida
MA_10429819g0010 No alias No annotation 0.03 Archaeplastida
MA_10429819g0020 No alias non-proteolytic core component ClpR of chloroplast... 0.03 Archaeplastida
MA_6114g0010 No alias ATP-dependent Clp protease proteolytic subunit-related... 0.04 Archaeplastida
Mp6g21300.1 No alias non-proteolytic core component ClpR of chloroplast... 0.03 Archaeplastida
Mp7g03170.1 No alias non-proteolytic core component ClpR of chloroplast... 0.03 Archaeplastida
Pp3c16_17780V3.1 No alias CLP protease proteolytic subunit 1 0.03 Archaeplastida
Smo153292 No alias Protein degradation.peptidase families.serine-type... 0.03 Archaeplastida
Solyc01g099690.3.1 No alias non-proteolytic core component ClpR of chloroplast... 0.03 Archaeplastida
Solyc08g077890.3.1 No alias non-proteolytic core component ClpR of chloroplast... 0.02 Archaeplastida
Solyc10g049710.2.1 No alias non-proteolytic core component ClpR of chloroplast... 0.04 Archaeplastida
Zm00001e001632_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e017288_P001 No alias non-proteolytic core component ClpR of chloroplast... 0.04 Archaeplastida
Zm00001e032571_P001 No alias non-proteolytic core component ClpR of chloroplast... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR023562 ClpP/TepA 119 298
No external refs found!