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  5. Pp3c3_13140V3.1

Pp3c3_13140V3.1


Description : syntaxin of plants 131


Gene families : OG0000372 (Archaeplastida) Phylogenetic Tree(s): OG0000372_tree ,
OG_05_0002991 (LandPlants) Phylogenetic Tree(s): OG_05_0002991_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c3_13140V3.1
Cluster HCCA: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
Zm00001e011479_P001 No alias SYP1-group Qa-type SNARE component 0.02 Archaeplastida
Zm00001e012082_P001 No alias Qa-SNARE component KNOLLE of SNARE cell-plate vesicle... 0.02 Archaeplastida
Zm00001e032875_P002 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
CC GO:0030286 dynein complex IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 249 300
IPR006011 Syntaxin_N 34 247
No external refs found!