Pp3c3_13220V3.1


Description : non-photochemical quenching 1


Gene families : OG0005008 (Archaeplastida) Phylogenetic Tree(s): OG0005008_tree ,
OG_05_0007173 (LandPlants) Phylogenetic Tree(s): OG_05_0007173_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c3_13220V3.1
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00117p00058770 evm_27.TU.AmTr_v1... Secondary metabolism.terpenoids.terpenoid... 0.03 Archaeplastida
AT1G08550 NPQ1, AVDE1 non-photochemical quenching 1 0.03 Archaeplastida
GSVIVT01026405001 No alias Secondary metabolism.terpenoids.terpenoid... 0.08 Archaeplastida
Gb_27593 No alias violaxanthin de-epoxidase. violaxanthin de-epoxidase (VDE) 0.04 Archaeplastida
LOC_Os04g31040.1 No alias violaxanthin de-epoxidase. violaxanthin de-epoxidase (VDE) 0.03 Archaeplastida
MA_10426812g0010 No alias violaxanthin de-epoxidase. violaxanthin de-epoxidase (VDE) 0.06 Archaeplastida
MA_6771199g0010 No alias no hits & (original description: none) 0.08 Archaeplastida
Mp7g15960.1 No alias violaxanthin de-epoxidase. violaxanthin de-epoxidase (VDE) 0.08 Archaeplastida
Solyc04g050930.3.1 No alias violaxanthin de-epoxidase. violaxanthin de-epoxidase (VDE) 0.04 Archaeplastida
Zm00001e008403_P001 No alias violaxanthin de-epoxidase. violaxanthin de-epoxidase (VDE) 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003747 translation release factor activity IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!