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  5. Pp3c3_13290V3.1

Pp3c3_13290V3.1


Description : RING/U-box superfamily protein


Gene families : OG0000316 (Archaeplastida) Phylogenetic Tree(s): OG0000316_tree ,
OG_05_0084789 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c3_13290V3.1
Cluster HCCA: Cluster_182

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00129p00116540 evm_27.TU.AmTr_v1... Probable E3 ubiquitin-protein ligase ARI5 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00129p00117090 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
GSVIVT01016056001 No alias Probable E3 ubiquitin-protein ligase ARI3 OS=Arabidopsis thaliana 0.02 Archaeplastida
LOC_Os09g26470.1 No alias plant-specific E3 ubiquitin ligase (RSL/RFA) 0.02 Archaeplastida
MA_132042g0010 No alias plant-specific E3 ubiquitin ligase (RSL/RFA) 0.02 Archaeplastida
Smo415256 No alias No description available 0.02 Archaeplastida
Solyc09g064300.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e022192_P001 No alias plant-specific E3 ubiquitin ligase (RSL/RFA) 0.02 Archaeplastida
Zm00001e034155_P001 No alias plant-specific E3 ubiquitin ligase (RSL/RFA) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!