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  5. Pp3c3_14260V3.1

Pp3c3_14260V3.1


Description : nuclear factor Y, subunit B3


Gene families : OG0000142 (Archaeplastida) Phylogenetic Tree(s): OG0000142_tree ,
OG_05_0085158 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c3_14260V3.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000057.46 No alias Cell cycle.interphase.DNA replication.elongation.DNA... 0.02 Archaeplastida
GSVIVT01010264001 No alias RNA biosynthesis.transcriptional activation.NF-Y... 0.02 Archaeplastida
Gb_08726 No alias component NF-YB of NF-Y transcription factor complex 0.02 Archaeplastida
Gb_13217 No alias non-catalytic component Dpb4 of DNA polymerase epsilon complex 0.02 Archaeplastida
LOC_Os05g49780.1 No alias component NF-YB of NF-Y transcription factor complex 0.05 Archaeplastida
MA_1115172g0010 No alias component NF-YB of NF-Y transcription factor complex 0.02 Archaeplastida
MA_152275g0010 No alias component beta of TATA box-binding protein NC2 regulator complex 0.02 Archaeplastida
MA_903853g0010 No alias component NF-YB of NF-Y transcription factor complex 0.02 Archaeplastida
Smo227538 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.03 Archaeplastida
Smo442185 No alias RNA biosynthesis.transcriptional activation.NF-Y... 0.02 Archaeplastida
Zm00001e033623_P001 No alias non-catalytic component Dpb4 of DNA polymerase epsilon complex 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP Neighborhood
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
CC GO:0061617 MICOS complex IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
CC GO:1905354 exoribonuclease complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!