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  5. Pp3c3_17140V3.1

Pp3c3_17140V3.1


Description : binding


Gene families : OG0002678 (Archaeplastida) Phylogenetic Tree(s): OG0002678_tree ,
OG_05_0004601 (LandPlants) Phylogenetic Tree(s): OG_05_0004601_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c3_17140V3.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
Cre03.g189605 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.03 Archaeplastida
GSVIVT01015096001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.02 Archaeplastida
Gb_17412 No alias component VIP6/CTR9 of PAF1C transcription initiation... 0.04 Archaeplastida
MA_202g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp5g24200.1 No alias component VIP6/CTR9 of PAF1C transcription initiation... 0.03 Archaeplastida
Smo149863 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.02 Archaeplastida
Solyc07g041510.3.1 No alias component VIP6/CTR9 of PAF1C transcription initiation... 0.06 Archaeplastida
Zm00001e007203_P003 No alias component VIP6/CTR9 of PAF1C transcription initiation... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030126 COPI vesicle coat IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!