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Description : Alba DNA/RNA-binding protein
Gene families : OG0000895 (Archaeplastida) Phylogenetic Tree(s): OG0000895_tree ,
OG_05_0000703 (LandPlants) Phylogenetic Tree(s): OG_05_0000703_tree ,
OG_06_0000624 (SeedPlants) Phylogenetic Tree(s): OG_06_0000624_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT1G20220 | |
| Cluster | HCCA: Cluster_213 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| LOC_Os04g34940.1 | No alias | component RPP25/POP6 | RPP20/POP7 of RNA-dependent RNase... | 0.03 | Archaeplastida | |
| Pp3c23_8810V3.1 | No alias | Alba DNA/RNA-binding protein | 0.02 | Archaeplastida | |
| Zm00001e039020_P004 | No alias | component RPP25/POP6 | RPP20/POP7 of RNA-dependent RNase... | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| CC | GO:0005829 | cytosol | IDA | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| CC | GO:0009505 | plant-type cell wall | IDA | Interproscan |
| CC | GO:0009506 | plasmodesma | IDA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000307 | cyclin-dependent protein kinase holoenzyme complex | IEP | Neighborhood |
| BP | GO:0000723 | telomere maintenance | IEP | Neighborhood |
| MF | GO:0003727 | single-stranded RNA binding | IEP | Neighborhood |
| MF | GO:0004386 | helicase activity | IEP | Neighborhood |
| BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
| BP | GO:0006302 | double-strand break repair | IEP | Neighborhood |
| BP | GO:0006310 | DNA recombination | IEP | Neighborhood |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Neighborhood |
| MF | GO:0008143 | poly(A) binding | IEP | Neighborhood |
| BP | GO:0009314 | response to radiation | IEP | Neighborhood |
| BP | GO:0010212 | response to ionizing radiation | IEP | Neighborhood |
| BP | GO:0010332 | response to gamma radiation | IEP | Neighborhood |
| MF | GO:0016538 | cyclin-dependent protein serine/threonine kinase regulator activity | IEP | Neighborhood |
| MF | GO:0019207 | kinase regulator activity | IEP | Neighborhood |
| MF | GO:0019887 | protein kinase regulator activity | IEP | Neighborhood |
| MF | GO:0030332 | cyclin binding | IEP | Neighborhood |
| BP | GO:0032200 | telomere organization | IEP | Neighborhood |
| BP | GO:0032204 | regulation of telomere maintenance | IEP | Neighborhood |
| BP | GO:0033044 | regulation of chromosome organization | IEP | Neighborhood |
| BP | GO:0033554 | cellular response to stress | IEP | Neighborhood |
| BP | GO:0043247 | telomere maintenance in response to DNA damage | IEP | Neighborhood |
| BP | GO:0051726 | regulation of cell cycle | IEP | Neighborhood |
| BP | GO:0060249 | anatomical structure homeostasis | IEP | Neighborhood |
| CC | GO:0061695 | transferase complex, transferring phosphorus-containing groups | IEP | Neighborhood |
| MF | GO:0070717 | poly-purine tract binding | IEP | Neighborhood |
| CC | GO:1902554 | serine/threonine protein kinase complex | IEP | Neighborhood |
| CC | GO:1902911 | protein kinase complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002775 | DNA/RNA-bd_Alba-like | 19 | 83 |
| No external refs found! |