1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c3_20320V3.1

Pp3c3_20320V3.1


Description : Pectin lyase-like superfamily protein


Gene families : OG0000134 (Archaeplastida) Phylogenetic Tree(s): OG0000134_tree ,
OG_05_0084776 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c3_20320V3.1
Cluster HCCA: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00123190 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.02 Archaeplastida
AMTR_s00078p00106380 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.03 Archaeplastida
AMTR_s00120p00111300 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and degradation.pectate lyase 0.05 Archaeplastida
AT1G04680 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT1G11920 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
AT1G14420 AT59 Pectate lyase family protein 0.02 Archaeplastida
AT2G02720 No alias Pectate lyase family protein 0.03 Archaeplastida
AT3G27400 No alias Pectin lyase-like superfamily protein 0.06 Archaeplastida
AT3G53190 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
AT4G22080 RHS14 root hair specific 14 0.04 Archaeplastida
AT4G24780 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT5G09280 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT5G15110 No alias Pectate lyase family protein 0.02 Archaeplastida
GSVIVT01014682001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.02 Archaeplastida
GSVIVT01016209001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.02 Archaeplastida
GSVIVT01033671001 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.03 Archaeplastida
LOC_Os04g05050.1 No alias pectate lyase 0.08 Archaeplastida
LOC_Os06g05260.1 No alias pectate lyase 0.03 Archaeplastida
LOC_Os06g38510.2 No alias pectate lyase 0.02 Archaeplastida
LOC_Os10g31910.1 No alias pectate lyase 0.08 Archaeplastida
MA_101171g0010 No alias pectate lyase 0.02 Archaeplastida
MA_103716g0010 No alias pectate lyase 0.03 Archaeplastida
MA_10426822g0020 No alias pectate lyase 0.02 Archaeplastida
MA_10429028g0020 No alias pectate lyase 0.01 Archaeplastida
MA_10430145g0020 No alias pectate lyase 0.02 Archaeplastida
MA_10430145g0030 No alias pectate lyase 0.03 Archaeplastida
MA_10437227g0030 No alias pectate lyase 0.02 Archaeplastida
MA_204440g0010 No alias Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen... 0.02 Archaeplastida
MA_476625g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_62112g0010 No alias pectate lyase 0.02 Archaeplastida
Mp8g00770.1 No alias pectate lyase 0.02 Archaeplastida
Pp3c17_16370V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Pp3c1_33130V3.1 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
Pp3c1_4040V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c22_19760V3.1 No alias Pectate lyase family protein 0.05 Archaeplastida
Pp3c22_19780V3.1 No alias Pectate lyase family protein 0.05 Archaeplastida
Pp3c2_9460V3.1 No alias Pectate lyase family protein 0.03 Archaeplastida
Smo421677 No alias Probable pectate lyase 9 OS=Arabidopsis thaliana 0.01 Archaeplastida
Smo439243 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.01 Archaeplastida
Smo81909 No alias Cell wall.pectin.modification and degradation.pectate lyase 0.02 Archaeplastida
Solyc02g093580.4.1 No alias pectate lyase 0.02 Archaeplastida
Solyc03g071570.3.1 No alias pectate lyase 0.07 Archaeplastida
Solyc03g111690.4.1 No alias pectate lyase 0.03 Archaeplastida
Solyc05g014000.4.1 No alias pectate lyase 0.03 Archaeplastida
Zm00001e004654_P002 No alias pectate lyase 0.03 Archaeplastida
Zm00001e008755_P002 No alias pectate lyase 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!