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  5. Pp3c3_21640V3.1

Pp3c3_21640V3.1


Description : RING/U-box superfamily protein


Gene families : OG0001188 (Archaeplastida) Phylogenetic Tree(s): OG0001188_tree ,
OG_05_0001068 (LandPlants) Phylogenetic Tree(s): OG_05_0001068_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c3_21640V3.1
Cluster HCCA: Cluster_268

Target Alias Description ECC score Gene Family Method Actions
AT3G47160 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G01520 No alias RING/U-box superfamily protein 0.02 Archaeplastida
GSVIVT01010297001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01010299001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01033965001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Mp6g12970.1 No alias RING-HC-class E3 ligase 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!