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  5. Pp3c3_24510V3.1

Pp3c3_24510V3.1


Description : proteolysis 6


Gene families : OG0002611 (Archaeplastida) Phylogenetic Tree(s): OG0002611_tree ,
OG_05_0004097 (LandPlants) Phylogenetic Tree(s): OG_05_0004097_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c3_24510V3.1
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00210330 evm_27.TU.AmTr_v1... Protein degradation.N-end rule pathway of targeted... 0.02 Archaeplastida
AT5G02310 PRT6 proteolysis 6 0.09 Archaeplastida
Cpa|evm.model.tig00001107.13 No alias Protein degradation.N-end rule pathway of targeted... 0.02 Archaeplastida
GSVIVT01034167001 No alias E3 ubiquitin-protein ligase PRT6 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_11947 No alias type-I-residues E3 ubiquitin ligase (PRT6) 0.03 Archaeplastida
LOC_Os01g05500.2 No alias type-I-residues E3 ubiquitin ligase (PRT6) 0.05 Archaeplastida
MA_10429079g0010 No alias E3 ubiquitin-protein ligase PRT6 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10429118g0010 No alias type-I-residues E3 ubiquitin ligase (PRT6) 0.06 Archaeplastida
MA_104366g0010 No alias No annotation 0.02 Archaeplastida
MA_387g0010 No alias type-I-residues E3 ubiquitin ligase (PRT6) 0.03 Archaeplastida
MA_767141g0010 No alias E3 ubiquitin-protein ligase PRT6 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp7g16320.1 No alias type-I-residues E3 ubiquitin ligase (PRT6) 0.06 Archaeplastida
Smo438209 No alias Protein degradation.N-end rule pathway of targeted... 0.05 Archaeplastida
Zm00001e016914_P004 No alias type-I-residues E3 ubiquitin ligase (PRT6) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002790 peptide secretion IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
CC GO:0005887 integral component of plasma membrane IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
BP GO:0009306 protein secretion IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!