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Description : Pentatricopeptide repeat (PPR) superfamily protein
Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000000 (LandPlants) Phylogenetic Tree(s): OG_05_0000000_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pp3c3_24770V3.1 | |
| Cluster | HCCA: Cluster_263 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00250660 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g57430,... | 0.02 | Archaeplastida | |
| AMTR_s00003p00182540 | No alias | Pentatricopeptide repeat-containing protein At1g25360... | 0.02 | Archaeplastida | |
| AMTR_s00029p00235510 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein DOT4,... | 0.05 | Archaeplastida | |
| AT1G56570 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Archaeplastida | |
| AT2G02750 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Archaeplastida | |
| AT2G33760 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Archaeplastida | |
| AT3G01580 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Archaeplastida | |
| AT3G03580 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Archaeplastida | |
| AT3G05240 | MEF19 | mitochondrial editing factor 19 | 0.02 | Archaeplastida | |
| AT4G21300 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Archaeplastida | |
| AT4G35130 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Archaeplastida | |
| AT4G39952 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Archaeplastida | |
| AT5G27110 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Archaeplastida | |
| AT5G40410 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Archaeplastida | |
| AT5G47460 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Archaeplastida | |
| GSVIVT01036393001 | No alias | Pentatricopeptide repeat-containing protein At1g71490... | 0.03 | Archaeplastida | |
| LOC_Os01g60430.1 | No alias | RNA editing factor (MEF10) | 0.02 | Archaeplastida | |
| LOC_Os01g62910.1 | No alias | Pentatricopeptide repeat-containing protein At3g46790,... | 0.02 | Archaeplastida | |
| LOC_Os04g14130.1 | No alias | Pentatricopeptide repeat-containing protein At5g16860... | 0.02 | Archaeplastida | |
| MA_20782g0010 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.02 | Archaeplastida | |
| MA_43615g0010 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | Archaeplastida | |
| Smo134463 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.02 | Archaeplastida | |
| Smo52548 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.02 | Archaeplastida | |
| Solyc12g042400.1.1 | No alias | Pentatricopeptide repeat-containing protein At2g29760,... | 0.02 | Archaeplastida | |
| Zm00001e008200_P001 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | Archaeplastida | |
| Zm00001e010837_P001 | No alias | Pentatricopeptide repeat-containing protein At5g48910... | 0.02 | Archaeplastida | |
| Zm00001e014825_P001 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.02 | Archaeplastida | |
| Zm00001e029119_P001 | No alias | Pentatricopeptide repeat-containing protein At2g33760... | 0.02 | Archaeplastida | |
| Zm00001e030887_P001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | Archaeplastida | |
| Zm00001e035764_P001 | No alias | Pentatricopeptide repeat-containing protein At2g34400... | 0.02 | Archaeplastida | |
| Zm00001e041082_P001 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006810 | transport | IEP | Neighborhood |
| BP | GO:0006886 | intracellular protein transport | IEP | Neighborhood |
| BP | GO:0006904 | vesicle docking involved in exocytosis | IEP | Neighborhood |
| BP | GO:0008104 | protein localization | IEP | Neighborhood |
| BP | GO:0015031 | protein transport | IEP | Neighborhood |
| BP | GO:0015833 | peptide transport | IEP | Neighborhood |
| BP | GO:0016192 | vesicle-mediated transport | IEP | Neighborhood |
| BP | GO:0022406 | membrane docking | IEP | Neighborhood |
| CC | GO:0030117 | membrane coat | IEP | Neighborhood |
| CC | GO:0030120 | vesicle coat | IEP | Neighborhood |
| CC | GO:0030126 | COPI vesicle coat | IEP | Neighborhood |
| BP | GO:0033036 | macromolecule localization | IEP | Neighborhood |
| BP | GO:0042886 | amide transport | IEP | Neighborhood |
| CC | GO:0044431 | Golgi apparatus part | IEP | Neighborhood |
| CC | GO:0044433 | cytoplasmic vesicle part | IEP | Neighborhood |
| BP | GO:0045184 | establishment of protein localization | IEP | Neighborhood |
| BP | GO:0048278 | vesicle docking | IEP | Neighborhood |
| BP | GO:0051179 | localization | IEP | Neighborhood |
| BP | GO:0051234 | establishment of localization | IEP | Neighborhood |
| BP | GO:0051640 | organelle localization | IEP | Neighborhood |
| BP | GO:0051641 | cellular localization | IEP | Neighborhood |
| BP | GO:0140029 | exocytic process | IEP | Neighborhood |
| BP | GO:0140056 | organelle localization by membrane tethering | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |