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  5. Pp3c3_25240V3.1

Pp3c3_25240V3.1


Description : Zinc finger C-x8-C-x5-C-x3-H type family protein


Gene families : OG0007012 (Archaeplastida) Phylogenetic Tree(s): OG0007012_tree ,
OG_05_0005443 (LandPlants) Phylogenetic Tree(s): OG_05_0005443_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c3_25240V3.1
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00102890 evm_27.TU.AmTr_v1... Zinc finger CCCH domain-containing protein 5... 0.04 Archaeplastida
GSVIVT01023150001 No alias Zinc finger CCCH domain-containing protein 5... 0.07 Archaeplastida
LOC_Os02g35150.1 No alias splicing factor (RGH3) 0.02 Archaeplastida
MA_118860g0010 No alias Zinc finger CCCH domain-containing protein 16 OS=Oryza... 0.02 Archaeplastida
Mp8g15710.1 No alias splicing factor (RGH3) 0.05 Archaeplastida
Solyc01g103090.4.1 No alias splicing factor (RGH3) 0.04 Archaeplastida
Zm00001e014831_P001 No alias splicing factor (RGH3) 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!