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  5. Pp3c3_26950V3.1

Pp3c3_26950V3.1


Description : plastid transcriptionally active 12


Gene families : OG0007706 (Archaeplastida) Phylogenetic Tree(s): OG0007706_tree ,
OG_05_0007174 (LandPlants) Phylogenetic Tree(s): OG_05_0007174_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c3_26950V3.1
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AT2G34640 PTAC12, HMR plastid transcriptionally active 12 0.05 Archaeplastida
GSVIVT01021555001 No alias RNA biosynthesis.organelle machineries.RNA polymerase... 0.03 Archaeplastida
Gb_08037 No alias PAP5/TAC12 cofactor of plastid-encoded RNA polymerase.... 0.04 Archaeplastida
LOC_Os01g56350.3 No alias PAP5/TAC12 cofactor of plastid-encoded RNA polymerase.... 0.06 Archaeplastida
MA_10428614g0010 No alias PAP5/TAC12 cofactor of plastid-encoded RNA polymerase.... 0.04 Archaeplastida
MA_8815984g0010 No alias PAP5/TAC12 cofactor of plastid-encoded RNA polymerase.... 0.06 Archaeplastida
Mp1g24680.1 No alias PAP5/TAC12 cofactor of plastid-encoded RNA polymerase.... 0.05 Archaeplastida
Solyc02g070390.3.1 No alias PAP5/TAC12 cofactor of plastid-encoded RNA polymerase.... 0.02 Archaeplastida
Zm00001e019697_P001 No alias PAP5/TAC12 cofactor of plastid-encoded RNA polymerase.... 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!