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  5. Pp3c3_27030V3.1

Pp3c3_27030V3.1


Description : histone H2A protein 9


Gene families : OG0001575 (Archaeplastida) Phylogenetic Tree(s): OG0001575_tree ,
OG_05_0001718 (LandPlants) Phylogenetic Tree(s): OG_05_0001718_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c3_27030V3.1
Cluster HCCA: Cluster_252

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00145770 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H2A-type histone 0.03 Archaeplastida
AT3G54560 HTA11 histone H2A 11 0.05 Archaeplastida
GSVIVT01003139001 No alias Chromatin organisation.histones.H2A-type histone 0.02 Archaeplastida
Gb_04984 No alias histone (H2A) 0.03 Archaeplastida
LOC_Os03g53190.2 No alias histone (H2A) 0.02 Archaeplastida
Mp1g09020.1 No alias histone (H2A) 0.03 Archaeplastida
Solyc06g084090.4.1 No alias histone (H2A) 0.03 Archaeplastida
Zm00001e012057_P001 No alias histone (H2A) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
InterPro domains Description Start Stop
IPR032454 Histone_H2A_C 113 143
IPR007125 Histone_H2A/H2B/H3 29 112
No external refs found!