AT4G34870 (ROC5, ATCYP1)


Aliases : ROC5, ATCYP1

Description : rotamase cyclophilin 5


Gene families : OG0000258 (Archaeplastida) Phylogenetic Tree(s): OG0000258_tree ,
OG_05_0000274 (LandPlants) Phylogenetic Tree(s): OG_05_0000274_tree ,
OG_06_0001120 (SeedPlants) Phylogenetic Tree(s): OG_06_0001120_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G34870
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00245680 evm_27.TU.AmTr_v1... Protein modification.protein folding and quality... 0.02 Archaeplastida
Cpa|evm.model.tig00020904.49 No alias Protein modification.protein folding and quality... 0.02 Archaeplastida
GSVIVT01024047001 No alias Protein modification.protein folding and quality... 0.05 Archaeplastida
Gb_37361 No alias protein folding catalyst 0.04 Archaeplastida
LOC_Os06g49480.1 No alias protein folding catalyst 0.02 Archaeplastida
Pp3c20_18690V3.1 No alias No annotation 0.04 Archaeplastida
Pp3c8_17390V3.1 No alias cyclophilin 5 0.02 Archaeplastida
Smo165790 No alias Protein modification.protein folding and quality... 0.03 Archaeplastida
Zm00001e002661_P001 No alias protein folding catalyst 0.03 Archaeplastida
Zm00001e013222_P003 No alias protein folding catalyst 0.05 Archaeplastida
Zm00001e032890_P001 No alias protein folding catalyst 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity ISS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005774 vacuolar membrane IDA Interproscan
CC GO:0005794 Golgi apparatus IDA Interproscan
CC GO:0005829 cytosol IDA Interproscan
CC GO:0005829 cytosol ISS Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0006094 gluconeogenesis RCA Interproscan
BP GO:0006096 glycolytic process RCA Interproscan
BP GO:0006457 protein folding ISS Interproscan
BP GO:0007165 signal transduction ISS Interproscan
CC GO:0009507 chloroplast IDA Interproscan
BP GO:0009651 response to salt stress RCA Interproscan
BP GO:0046686 response to cadmium ion RCA Interproscan
CC GO:0048046 apoplast IDA Interproscan
Type GO Term Name Evidence Source
BP GO:0000060 protein import into nucleus, translocation IEP Neighborhood
CC GO:0000139 Golgi membrane IEP Neighborhood
BP GO:0001510 RNA methylation IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0004017 adenylate kinase activity IEP Neighborhood
MF GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity IEP Neighborhood
MF GO:0004619 phosphoglycerate mutase activity IEP Neighborhood
MF GO:0004750 ribulose-phosphate 3-epimerase activity IEP Neighborhood
MF GO:0004801 sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0005513 detection of calcium ion IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005665 RNA polymerase II, core complex IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
CC GO:0005740 mitochondrial envelope IEP Neighborhood
CC GO:0005744 TIM23 mitochondrial import inner membrane translocase complex IEP Neighborhood
CC GO:0005747 mitochondrial respiratory chain complex I IEP Neighborhood
CC GO:0005750 mitochondrial respiratory chain complex III IEP Neighborhood
CC GO:0005753 mitochondrial proton-transporting ATP synthase complex IEP Neighborhood
CC GO:0005770 late endosome IEP Neighborhood
CC GO:0005771 multivesicular body IEP Neighborhood
CC GO:0005795 Golgi stack IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
CC GO:0005911 cell-cell junction IEP Neighborhood
BP GO:0006084 acetyl-CoA metabolic process IEP Neighborhood
BP GO:0006085 acetyl-CoA biosynthetic process IEP Neighborhood
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006623 protein targeting to vacuole IEP Neighborhood
BP GO:0006637 acyl-CoA metabolic process IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0007021 tubulin complex assembly IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
MF GO:0008320 protein transmembrane transporter activity IEP Neighborhood
MF GO:0008443 phosphofructokinase activity IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009060 aerobic respiration IEP Neighborhood
CC GO:0009504 cell plate IEP Neighborhood
CC GO:0009506 plasmodesma IEP Neighborhood
CC GO:0009532 plastid stroma IEP Neighborhood
CC GO:0009570 chloroplast stroma IEP Neighborhood
BP GO:0009593 detection of chemical stimulus IEP Neighborhood
BP GO:0009612 response to mechanical stimulus IEP Neighborhood
BP GO:0009743 response to carbohydrate IEP Neighborhood
BP GO:0009744 response to sucrose IEP Neighborhood
BP GO:0009746 response to hexose IEP Neighborhood
BP GO:0009749 response to glucose IEP Neighborhood
BP GO:0009750 response to fructose IEP Neighborhood
BP GO:0009853 photorespiration IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
CC GO:0010318 pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex IEP Neighborhood
BP GO:0010393 galacturonan metabolic process IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Neighborhood
BP GO:0016125 sterol metabolic process IEP Neighborhood
BP GO:0016126 sterol biosynthetic process IEP Neighborhood
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016681 oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor IEP Neighborhood
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Neighborhood
MF GO:0016776 phosphotransferase activity, phosphate group as acceptor IEP Neighborhood
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0019632 shikimate metabolic process IEP Neighborhood
BP GO:0019722 calcium-mediated signaling IEP Neighborhood
BP GO:0019932 second-messenger-mediated signaling IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
CC GO:0022625 cytosolic large ribosomal subunit IEP Neighborhood
MF GO:0022884 macromolecule transmembrane transporter activity IEP Neighborhood
CC GO:0030054 cell junction IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
CC GO:0030964 NADH dehydrogenase complex IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
CC GO:0032588 trans-Golgi network membrane IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0033587 shikimate biosynthetic process IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP Neighborhood
BP GO:0034284 response to monosaccharide IEP Neighborhood
BP GO:0034285 response to disaccharide IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0035383 thioester metabolic process IEP Neighborhood
BP GO:0035384 thioester biosynthetic process IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
BP GO:0035966 response to topologically incorrect protein IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
MF GO:0042887 amide transmembrane transporter activity IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043094 cellular metabolic compound salvage IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044434 chloroplast part IEP Neighborhood
CC GO:0044435 plastid part IEP Neighborhood
CC GO:0044445 cytosolic part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
CC GO:0045259 proton-transporting ATP synthase complex IEP Neighborhood
CC GO:0045271 respiratory chain complex I IEP Neighborhood
CC GO:0045275 respiratory chain complex III IEP Neighborhood
MF GO:0045309 protein phosphorylated amino acid binding IEP Neighborhood
BP GO:0045333 cellular respiration IEP Neighborhood
BP GO:0045488 pectin metabolic process IEP Neighborhood
BP GO:0046165 alcohol biosynthetic process IEP Neighborhood
MF GO:0046537 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0047334 diphosphate-fructose-6-phosphate 1-phosphotransferase activity IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
MF GO:0050145 nucleoside monophosphate kinase activity IEP Neighborhood
MF GO:0051219 phosphoprotein binding IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051592 response to calcium ion IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0051788 response to misfolded protein IEP Neighborhood
BP GO:0052541 plant-type cell wall cellulose metabolic process IEP Neighborhood
BP GO:0052546 cell wall pectin metabolic process IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0071616 acyl-CoA biosynthetic process IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0072665 protein localization to vacuole IEP Neighborhood
BP GO:0072666 establishment of protein localization to vacuole IEP Neighborhood
BP GO:0080129 proteasome core complex assembly IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
CC GO:0098803 respiratory chain complex IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
MF GO:1904680 peptide transmembrane transporter activity IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002130 Cyclophilin-type_PPIase_dom 9 169
No external refs found!