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  5. Pp3c3_29590V3.1

Pp3c3_29590V3.1


Description : SAC3/GANP/Nin1/mts3/eIF-3 p25 family


Gene families : OG0001454 (Archaeplastida) Phylogenetic Tree(s): OG0001454_tree ,
OG_05_0002112 (LandPlants) Phylogenetic Tree(s): OG_05_0002112_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c3_29590V3.1
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00140350 evm_27.TU.AmTr_v1... RNA processing.messenger ribonucleoprotein particle... 0.03 Archaeplastida
AT3G06290 No alias SAC3/GANP/Nin1/mts3/eIF-3 p25 family 0.06 Archaeplastida
Cre02.g143600 No alias RNA processing.messenger ribonucleoprotein particle... 0.03 Archaeplastida
GSVIVT01017853001 No alias RNA processing.messenger ribonucleoprotein particle... 0.07 Archaeplastida
Gb_02851 No alias SAC3 family protein B OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_36374 No alias scaffold component GANP/SAC3 of TREX-2 mRNP trafficking complex 0.02 Archaeplastida
LOC_Os07g45160.1 No alias scaffold component GANP/SAC3 of TREX-2 mRNP trafficking complex 0.06 Archaeplastida
MA_10433102g0010 No alias scaffold component GANP/SAC3 of TREX-2 mRNP trafficking complex 0.02 Archaeplastida
MA_10433322g0010 No alias SAC3 family protein B OS=Arabidopsis thaliana... 0.09 Archaeplastida
Mp1g09900.1 No alias scaffold component GANP/SAC3 of TREX-2 mRNP trafficking complex 0.06 Archaeplastida
Smo438035 No alias RNA processing.messenger ribonucleoprotein particle... 0.07 Archaeplastida
Solyc06g061120.4.1 No alias scaffold component GANP/SAC3 of TREX-2 mRNP trafficking complex 0.02 Archaeplastida
Solyc12g035670.3.1 No alias scaffold component GANP/SAC3 of TREX-2 mRNP trafficking complex 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002790 peptide secretion IEP Neighborhood
CC GO:0005887 integral component of plasma membrane IEP Neighborhood
BP GO:0009306 protein secretion IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!