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  5. Pp3c3_33160V3.1

Pp3c3_33160V3.1


Description : squalene synthase 1


Gene families : OG0003623 (Archaeplastida) Phylogenetic Tree(s): OG0003623_tree ,
OG_05_0003611 (LandPlants) Phylogenetic Tree(s): OG_05_0003611_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c3_33160V3.1
Cluster HCCA: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001107.11 No alias Secondary metabolism.terpenoids.terpenoid... 0.02 Archaeplastida
LOC_Os03g59040.1 No alias squalene synthase 0.02 Archaeplastida
Smo96714 No alias Secondary metabolism.terpenoids.terpenoid... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
MF GO:0000287 magnesium ion binding IEP Neighborhood
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006555 methionine metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!