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  5. Pp3c3_34380V3.1

Pp3c3_34380V3.1


Description : No annotation


Gene families : OG0001266 (Archaeplastida) Phylogenetic Tree(s): OG0001266_tree ,
OG_05_0000955 (LandPlants) Phylogenetic Tree(s): OG_05_0000955_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c3_34380V3.1
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01016065001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.03 Archaeplastida
GSVIVT01037861001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.04 Archaeplastida
LOC_Os04g56300.1 No alias component ADA1 of SAGA transcription co-activator complex 0.02 Archaeplastida
LOC_Os12g39090.2 No alias component ADA1 of SAGA transcription co-activator complex 0.02 Archaeplastida
MA_41437g0010 No alias component ADA1 of SAGA transcription co-activator complex 0.04 Archaeplastida
Solyc03g117820.1.1 No alias component ADA1 of SAGA transcription co-activator complex 0.03 Archaeplastida
Solyc06g068610.3.1 No alias component ADA1 of SAGA transcription co-activator complex 0.05 Archaeplastida
Zm00001e011984_P001 No alias component ADA1 of SAGA transcription co-activator complex 0.02 Archaeplastida
Zm00001e041823_P001 No alias component ADA1 of SAGA transcription co-activator complex 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!