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  5. Pp3c3_36740V3.1

Pp3c3_36740V3.1


Description : pumilio 1


Gene families : OG0000536 (Archaeplastida) Phylogenetic Tree(s): OG0000536_tree ,
OG_05_0000342 (LandPlants) Phylogenetic Tree(s): OG_05_0000342_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c3_36740V3.1
Cluster HCCA: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00067490 evm_27.TU.AmTr_v1... Pumilio homolog 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00012p00251030 evm_27.TU.AmTr_v1... Pumilio homolog 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00025p00181800 evm_27.TU.AmTr_v1... Pumilio homolog 5 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT2G29190 APUM2, PUM2 pumilio 2 0.02 Archaeplastida
AT3G20250 PUM5, APUM5 pumilio 5 0.04 Archaeplastida
GSVIVT01016507001 No alias Pumilio homolog 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01024918001 No alias Pumilio homolog 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_23280 No alias Pumilio homolog 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os02g57390.1 No alias Pumilio homolog 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os09g32210.1 No alias Pumilio homolog 5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10159883g0010 No alias Pumilio homolog 5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_9025256g0010 No alias Pumilio homolog 5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc04g011580.4.1 No alias Pumilio homolog 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e021916_P002 No alias Pumilio homolog 5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e023593_P002 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e029661_P001 No alias Pumilio homolog 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002790 peptide secretion IEP Neighborhood
CC GO:0005887 integral component of plasma membrane IEP Neighborhood
BP GO:0009306 protein secretion IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!