Pp3c3_37020V3.1


Description : Histone superfamily protein


Gene families : OG0000119 (Archaeplastida) Phylogenetic Tree(s): OG0000119_tree ,
OG_05_0000124 (LandPlants) Phylogenetic Tree(s): OG_05_0000124_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c3_37020V3.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00168040 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
AMTR_s00030p00044250 No alias Chromatin organisation.histones.H3-type histone 0.03 Archaeplastida
AT1G09200 No alias Histone superfamily protein 0.04 Archaeplastida
AT1G19890 ATMGH3, MGH3 male-gamete-specific histone H3 0.02 Archaeplastida
AT3G27360 No alias Histone superfamily protein 0.05 Archaeplastida
AT5G10390 No alias Histone superfamily protein 0.03 Archaeplastida
AT5G10400 No alias Histone superfamily protein 0.03 Archaeplastida
AT5G65360 No alias Histone superfamily protein 0.03 Archaeplastida
Cpa|evm.model.tig00000241.39 No alias Cell cycle.mitosis and meiosis.chromosome... 0.01 Archaeplastida
Cre16.g661450 No alias Cell cycle.mitosis and meiosis.chromosome... 0.02 Archaeplastida
GSVIVT01025316001 No alias Histone H3.2 OS=Pisum sativum 0.02 Archaeplastida
GSVIVT01025318001 No alias Histone H3.2 OS=Pisum sativum 0.07 Archaeplastida
GSVIVT01026582001 No alias Histone H3.2 OS=Pisum sativum 0.04 Archaeplastida
GSVIVT01032047001 No alias Histone H3 OS=Volvox carteri 0.04 Archaeplastida
Gb_15586 No alias histone (H3) 0.01 Archaeplastida
Gb_27618 No alias histone (H3) 0.05 Archaeplastida
Gb_29026 No alias histone (H3) 0.03 Archaeplastida
Gb_29027 No alias histone (H3) 0.05 Archaeplastida
LOC_Os01g64640.1 No alias histone (H3) 0.02 Archaeplastida
LOC_Os05g41080.1 No alias histone H3 variant (CENH3) 0.02 Archaeplastida
LOC_Os11g05730.1 No alias histone (H3) 0.02 Archaeplastida
MA_24261g0010 No alias histone (H3) 0.02 Archaeplastida
Mp7g10700.1 No alias histone (H3) 0.02 Archaeplastida
Smo103546 No alias Chromatin organisation.histones.H3-type histone 0.05 Archaeplastida
Smo171192 No alias Cell cycle.mitosis and meiosis.chromosome... 0.03 Archaeplastida
Smo269004 No alias Chromatin organisation.histones.H3-type histone 0.04 Archaeplastida
Smo438193 No alias Chromatin organisation.histones.H3-type histone 0.02 Archaeplastida
Smo78992 No alias Chromatin organisation.histones.H3-type histone 0.03 Archaeplastida
Solyc01g074000.3.1 No alias histone (H3) 0.02 Archaeplastida
Solyc01g079110.4.1 No alias histone (H3) 0.02 Archaeplastida
Solyc01g080600.4.1 No alias histone (H3) 0.02 Archaeplastida
Solyc01g086820.4.1 No alias histone (H3) 0.02 Archaeplastida
Solyc02g077480.1.1 No alias histone (H3) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006487 protein N-linked glycosylation IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
CC GO:0008250 oligosaccharyltransferase complex IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
CC GO:0030684 preribosome IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0032040 small-subunit processome IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
CC GO:0034998 oligosaccharyltransferase I complex IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
CC GO:0061617 MICOS complex IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!