Description : Histone superfamily protein
Gene families : OG0000119 (Archaeplastida) Phylogenetic Tree(s): OG0000119_tree ,
OG_05_0000124 (LandPlants) Phylogenetic Tree(s): OG_05_0000124_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Pp3c3_37020V3.1 | |
Cluster | HCCA: Cluster_121 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00018p00168040 | No alias | Chromatin organisation.histones.H3-type histone | 0.02 | Archaeplastida | |
AMTR_s00030p00044250 | No alias | Chromatin organisation.histones.H3-type histone | 0.03 | Archaeplastida | |
AT1G09200 | No alias | Histone superfamily protein | 0.04 | Archaeplastida | |
AT1G19890 | ATMGH3, MGH3 | male-gamete-specific histone H3 | 0.02 | Archaeplastida | |
AT3G27360 | No alias | Histone superfamily protein | 0.05 | Archaeplastida | |
AT5G10390 | No alias | Histone superfamily protein | 0.03 | Archaeplastida | |
AT5G10400 | No alias | Histone superfamily protein | 0.03 | Archaeplastida | |
AT5G65360 | No alias | Histone superfamily protein | 0.03 | Archaeplastida | |
Cpa|evm.model.tig00000241.39 | No alias | Cell cycle.mitosis and meiosis.chromosome... | 0.01 | Archaeplastida | |
Cre16.g661450 | No alias | Cell cycle.mitosis and meiosis.chromosome... | 0.02 | Archaeplastida | |
GSVIVT01025316001 | No alias | Histone H3.2 OS=Pisum sativum | 0.02 | Archaeplastida | |
GSVIVT01025318001 | No alias | Histone H3.2 OS=Pisum sativum | 0.07 | Archaeplastida | |
GSVIVT01026582001 | No alias | Histone H3.2 OS=Pisum sativum | 0.04 | Archaeplastida | |
GSVIVT01032047001 | No alias | Histone H3 OS=Volvox carteri | 0.04 | Archaeplastida | |
Gb_15586 | No alias | histone (H3) | 0.01 | Archaeplastida | |
Gb_27618 | No alias | histone (H3) | 0.05 | Archaeplastida | |
Gb_29026 | No alias | histone (H3) | 0.03 | Archaeplastida | |
Gb_29027 | No alias | histone (H3) | 0.05 | Archaeplastida | |
LOC_Os01g64640.1 | No alias | histone (H3) | 0.02 | Archaeplastida | |
LOC_Os05g41080.1 | No alias | histone H3 variant (CENH3) | 0.02 | Archaeplastida | |
LOC_Os11g05730.1 | No alias | histone (H3) | 0.02 | Archaeplastida | |
MA_24261g0010 | No alias | histone (H3) | 0.02 | Archaeplastida | |
Mp7g10700.1 | No alias | histone (H3) | 0.02 | Archaeplastida | |
Smo103546 | No alias | Chromatin organisation.histones.H3-type histone | 0.05 | Archaeplastida | |
Smo171192 | No alias | Cell cycle.mitosis and meiosis.chromosome... | 0.03 | Archaeplastida | |
Smo269004 | No alias | Chromatin organisation.histones.H3-type histone | 0.04 | Archaeplastida | |
Smo438193 | No alias | Chromatin organisation.histones.H3-type histone | 0.02 | Archaeplastida | |
Smo78992 | No alias | Chromatin organisation.histones.H3-type histone | 0.03 | Archaeplastida | |
Solyc01g074000.3.1 | No alias | histone (H3) | 0.02 | Archaeplastida | |
Solyc01g079110.4.1 | No alias | histone (H3) | 0.02 | Archaeplastida | |
Solyc01g080600.4.1 | No alias | histone (H3) | 0.02 | Archaeplastida | |
Solyc01g086820.4.1 | No alias | histone (H3) | 0.02 | Archaeplastida | |
Solyc02g077480.1.1 | No alias | histone (H3) | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003677 | DNA binding | IEP | Neighborhood |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Neighborhood |
CC | GO:0005575 | cellular_component | IEP | Neighborhood |
CC | GO:0005743 | mitochondrial inner membrane | IEP | Neighborhood |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0006260 | DNA replication | IEP | Neighborhood |
BP | GO:0006281 | DNA repair | IEP | Neighborhood |
BP | GO:0006310 | DNA recombination | IEP | Neighborhood |
BP | GO:0006351 | transcription, DNA-templated | IEP | Neighborhood |
BP | GO:0006486 | protein glycosylation | IEP | Neighborhood |
BP | GO:0006487 | protein N-linked glycosylation | IEP | Neighborhood |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Neighborhood |
CC | GO:0008250 | oligosaccharyltransferase complex | IEP | Neighborhood |
BP | GO:0009058 | biosynthetic process | IEP | Neighborhood |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:0009987 | cellular process | IEP | Neighborhood |
BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | Neighborhood |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | Neighborhood |
BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Neighborhood |
CC | GO:0019866 | organelle inner membrane | IEP | Neighborhood |
CC | GO:0030684 | preribosome | IEP | Neighborhood |
CC | GO:0031090 | organelle membrane | IEP | Neighborhood |
CC | GO:0031966 | mitochondrial membrane | IEP | Neighborhood |
CC | GO:0032040 | small-subunit processome | IEP | Neighborhood |
BP | GO:0032774 | RNA biosynthetic process | IEP | Neighborhood |
CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
BP | GO:0033554 | cellular response to stress | IEP | Neighborhood |
CC | GO:0033643 | host cell part | IEP | Neighborhood |
CC | GO:0033646 | host intracellular part | IEP | Neighborhood |
CC | GO:0033647 | host intracellular organelle | IEP | Neighborhood |
CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | Neighborhood |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Neighborhood |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Neighborhood |
CC | GO:0034998 | oligosaccharyltransferase I complex | IEP | Neighborhood |
CC | GO:0042025 | host cell nucleus | IEP | Neighborhood |
BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0043413 | macromolecule glycosylation | IEP | Neighborhood |
CC | GO:0044217 | other organism part | IEP | Neighborhood |
BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
BP | GO:0044249 | cellular biosynthetic process | IEP | Neighborhood |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Neighborhood |
CC | GO:0044422 | organelle part | IEP | Neighborhood |
CC | GO:0044424 | intracellular part | IEP | Neighborhood |
CC | GO:0044425 | membrane part | IEP | Neighborhood |
CC | GO:0044429 | mitochondrial part | IEP | Neighborhood |
CC | GO:0044432 | endoplasmic reticulum part | IEP | Neighborhood |
CC | GO:0044444 | cytoplasmic part | IEP | Neighborhood |
CC | GO:0044446 | intracellular organelle part | IEP | Neighborhood |
CC | GO:0044455 | mitochondrial membrane part | IEP | Neighborhood |
CC | GO:0044464 | cell part | IEP | Neighborhood |
BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
BP | GO:0051716 | cellular response to stimulus | IEP | Neighborhood |
CC | GO:0061617 | MICOS complex | IEP | Neighborhood |
BP | GO:0070085 | glycosylation | IEP | Neighborhood |
BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | Neighborhood |
MF | GO:0097747 | RNA polymerase activity | IEP | Neighborhood |
CC | GO:0098796 | membrane protein complex | IEP | Neighborhood |
CC | GO:0098798 | mitochondrial protein complex | IEP | Neighborhood |
CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | Neighborhood |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Neighborhood |
BP | GO:1901576 | organic substance biosynthetic process | IEP | Neighborhood |
CC | GO:1902494 | catalytic complex | IEP | Neighborhood |
CC | GO:1990234 | transferase complex | IEP | Neighborhood |
No InterPro domains available for this sequence
No external refs found! |