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  5. Pp3c3_37260V3.1

Pp3c3_37260V3.1


Description : phytoene desaturase 3


Gene families : OG0001144 (Archaeplastida) Phylogenetic Tree(s): OG0001144_tree ,
OG_05_0000948 (LandPlants) Phylogenetic Tree(s): OG_05_0000948_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c3_37260V3.1
Cluster HCCA: Cluster_275

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000655.47 No alias No description available 0.04 Archaeplastida
Cpa|evm.model.tig00001302.9 No alias No description available 0.04 Archaeplastida
Cpa|evm.model.tig00020734.51 No alias 15-cis-phytoene desaturase, chloroplastic/chromoplastic... 0.04 Archaeplastida
Cre13.g587500 No alias Phytoene dehydrogenase, chloroplastic/chromoplastic... 0.08 Archaeplastida
GSVIVT01023990001 No alias No description available 0.03 Archaeplastida
Gb_06069 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g47290.2 No alias no hits & (original description: none) 0.09 Archaeplastida
MA_10428599g0010 No alias no hits & (original description: none) 0.11 Archaeplastida
MA_580945g0010 No alias no hits & (original description: none) 0.08 Archaeplastida
Mp1g18160.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Pp3c21_13310V3.1 No alias phytoene desaturase 3 0.04 Archaeplastida
Smo74261 No alias 15-cis-phytoene desaturase, chloroplastic/chromoplastic... 0.04 Archaeplastida
Zm00001e007260_P002 No alias no hits & (original description: none) 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!