1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c3_5040V3.1

Pp3c3_5040V3.1


Description : C2H2 and C2HC zinc fingers superfamily protein


Gene families : OG0000055 (Archaeplastida) Phylogenetic Tree(s): OG0000055_tree ,
OG_05_0000021 (LandPlants) Phylogenetic Tree(s): OG_05_0000021_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Descriptiononditions, is shown. Add Actions
Neighborhood HRR: Pp3c3_5040V3.1
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00145510 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
GSVIVT01009401001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
LOC_Os03g11680.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os09g38610.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_424g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_57615g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Solyc05g006310.3.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e013379_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e032639_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e034883_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0003729 mRNA binding IEP Neighborhood
MF GO:0004645 phosphorylase activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
CC GO:0005685 U1 snRNP IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006376 mRNA splice site selection IEP Neighborhood
MF GO:0008184 glycogen phosphorylase activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Neighborhood
BP GO:0022618 ribonucleoprotein complex assembly IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0045765 regulation of angiogenesis IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050793 regulation of developmental process IEP Neighborhood
BP GO:0051239 regulation of multicellular organismal process IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Neighborhood
CC GO:0097525 spliceosomal snRNP complex IEP Neighborhood
CC GO:0120114 Sm-like protein family complex IEP Neighborhood
BP GO:1901342 regulation of vasculature development IEP Neighborhood
BP GO:2000026 regulation of multicellular organismal development IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!