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  5. Pp3c4_10640V3.1

Pp3c4_10640V3.1


Description : Pectin lyase-like superfamily protein


Gene families : OG0000078 (Archaeplastida) Phylogenetic Tree(s): OG0000078_tree ,
OG_05_0000108 (LandPlants) Phylogenetic Tree(s): OG_05_0000108_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c4_10640V3.1
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00092510 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AT2G36710 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
GSVIVT01001327001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
GSVIVT01014641001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
LOC_Os12g37660.1 No alias pectin methylesterase 0.02 Archaeplastida
MA_28575g0010 No alias pectin methylesterase 0.03 Archaeplastida
Mp5g03920.1 No alias pectin methylesterase 0.02 Archaeplastida
Mp5g03930.1 No alias pectin methylesterase 0.02 Archaeplastida
Pp3c3_35040V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c5_23400V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Smo81583 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
Solyc02g075620.4.1 No alias pectin methylesterase 0.04 Archaeplastida
Solyc12g098340.2.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc12g099230.2.1 No alias pectin methylesterase 0.02 Archaeplastida
Zm00001e035522_P001 No alias pectin methylesterase 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!