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  5. Pp3c4_11430V3.1

Pp3c4_11430V3.1


Description : polyubiquitin 10


Gene families : OG0000077 (Archaeplastida) Phylogenetic Tree(s): OG0000077_tree ,
OG_05_0000511 (LandPlants) Phylogenetic Tree(s): OG_05_0000511_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c4_11430V3.1
Cluster HCCA: Cluster_250

Target Alias Description ECC score Gene Family Method Actions
Cre07.g322100 No alias No description available 0.03 Archaeplastida
Gb_30150 No alias ubiquitin-fold protein (RUB) 0.02 Archaeplastida
MA_100402g0010 No alias ubiquitin-fold protein (UBQ) 0.05 Archaeplastida
MA_93495g0010 No alias ubiquitin-fold protein (UBQ) 0.02 Archaeplastida
Mp4g02760.1 No alias Ubiquitin-40S ribosomal protein S27a OS=Hordeum vulgare... 0.03 Archaeplastida
Mp7g14690.1 No alias component RPS27a of SSU proteome 0.06 Archaeplastida
Zm00001e036492_P001 No alias Ubiquitin-40S ribosomal protein S27a OS=Solanum... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 155 226
IPR000626 Ubiquitin_dom 3 74
IPR000626 Ubiquitin_dom 231 302
IPR000626 Ubiquitin_dom 79 150
No external refs found!