AT4G35670

Description : Pectin lyase-like superfamily protein

Gene families : OG0000096 (Archaeplastida) Phylogenetic Tree(s): OG0000096_tree ,
OG_05_0017377 (LandPlants) Phylogenetic Tree(s): OG_05_0017377_tree ,
OG_06_0015125 (SeedPlants) Phylogenetic Tree(s): OG_06_0015125_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G35670
Cluster	HCCA: Cluster_236

Target	Alias	Description	ECC score	Gene Family Method
AT1G56710	No alias	Pectin lyase-like superfamily protein	0.05	Archaeplastida
AT5G27530	No alias	Pectin lyase-like superfamily protein	0.09	Archaeplastida
GSVIVT01032114001	No alias	Polygalacturonase OS=Actinidia deliciosa	0.04	Archaeplastida
GSVIVT01032117001	No alias	Cell wall.pectin.modification and...	0.04	Archaeplastida
MA_10862g0010	No alias	Probable polygalacturonase At1g80170 OS=Arabidopsis...	0.02	Archaeplastida
Mp3g21140.1	No alias	Polygalacturonase At1g48100 OS=Arabidopsis thaliana...	0.02	Archaeplastida
Solyc04g025440.3.1	No alias	Probable polygalacturonase At1g80170 OS=Arabidopsis...	0.03	Archaeplastida
Solyc06g068040.3.1	No alias	Probable polygalacturonase At1g80170 OS=Arabidopsis...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004650	polygalacturonase activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Interproscan
BP	GO:0005975	carbohydrate metabolic process	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000904	cell morphogenesis involved in differentiation	IEP	Neighborhood
MF	GO:0004467	long-chain fatty acid-CoA ligase activity	IEP	Neighborhood
MF	GO:0004470	malic enzyme activity	IEP	Neighborhood
MF	GO:0004473	malate dehydrogenase (decarboxylating) (NADP+) activity	IEP	Neighborhood
MF	GO:0004611	phosphoenolpyruvate carboxykinase activity	IEP	Neighborhood
MF	GO:0004857	enzyme inhibitor activity	IEP	Neighborhood
MF	GO:0005215	transporter activity	IEP	Neighborhood
BP	GO:0006108	malate metabolic process	IEP	Neighborhood
MF	GO:0008324	cation transmembrane transporter activity	IEP	Neighborhood
MF	GO:0008553	proton-exporting ATPase activity, phosphorylative mechanism	IEP	Neighborhood
MF	GO:0008964	phosphoenolpyruvate carboxylase activity	IEP	Neighborhood
BP	GO:0009664	plant-type cell wall organization	IEP	Neighborhood
MF	GO:0009672	auxin:proton symporter activity	IEP	Neighborhood
BP	GO:0009826	unidimensional cell growth	IEP	Neighborhood
BP	GO:0009827	plant-type cell wall modification	IEP	Neighborhood
BP	GO:0009860	pollen tube growth	IEP	Neighborhood
BP	GO:0009932	cell tip growth	IEP	Neighborhood
MF	GO:0015075	ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015077	monovalent inorganic cation transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015078	proton transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015204	urea transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015645	fatty acid ligase activity	IEP	Neighborhood
MF	GO:0015662	ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	IEP	Neighborhood
BP	GO:0015840	urea transport	IEP	Neighborhood
BP	GO:0015985	energy coupled proton transport, down electrochemical gradient	IEP	Neighborhood
BP	GO:0015986	ATP synthesis coupled proton transport	IEP	Neighborhood
MF	GO:0016004	phospholipase activator activity	IEP	Neighborhood
MF	GO:0016652	oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor	IEP	Neighborhood
BP	GO:0019755	one-carbon compound transport	IEP	Neighborhood
MF	GO:0019829	cation-transporting ATPase activity	IEP	Neighborhood
MF	GO:0022804	active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0022853	active ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0022857	transmembrane transporter activity	IEP	Neighborhood
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Neighborhood
MF	GO:0030234	enzyme regulator activity	IEP	Neighborhood
CC	GO:0030427	site of polarized growth	IEP	Neighborhood
BP	GO:0034220	ion transmembrane transport	IEP	Neighborhood
CC	GO:0035838	growing cell tip	IEP	Neighborhood
MF	GO:0036442	proton-exporting ATPase activity	IEP	Neighborhood
BP	GO:0042545	cell wall modification	IEP	Neighborhood
MF	GO:0042625	ATPase coupled ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEP	Neighborhood
MF	GO:0042887	amide transmembrane transporter activity	IEP	Neighborhood
MF	GO:0043492	ATPase activity, coupled to movement of substances	IEP	Neighborhood
CC	GO:0044463	cell projection part	IEP	Neighborhood
BP	GO:0045229	external encapsulating structure organization	IEP	Neighborhood
MF	GO:0045309	protein phosphorylated amino acid binding	IEP	Neighborhood
MF	GO:0046910	pectinesterase inhibitor activity	IEP	Neighborhood
BP	GO:0048588	developmental cell growth	IEP	Neighborhood
MF	GO:0051219	phosphoprotein binding	IEP	Neighborhood
BP	GO:0051260	protein homooligomerization	IEP	Neighborhood
CC	GO:0051286	cell tip	IEP	Neighborhood
MF	GO:0060229	lipase activator activity	IEP	Neighborhood
BP	GO:0060560	developmental growth involved in morphogenesis	IEP	Neighborhood
BP	GO:0071555	cell wall organization	IEP	Neighborhood
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	Neighborhood
CC	GO:0090404	pollen tube tip	IEP	Neighborhood
BP	GO:0098655	cation transmembrane transport	IEP	Neighborhood
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Neighborhood
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Neighborhood
MF	GO:0098772	molecular function regulator	IEP	Neighborhood
CC	GO:0120038	plasma membrane bounded cell projection part	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000743	Glyco_hydro_28	55	376

External Links

No external refs found!

AT4G35670

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation