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  5. Pp3c4_1180V3.1

Pp3c4_1180V3.1


Description : lycopene cyclase


Gene families : OG0004729 (Archaeplastida) Phylogenetic Tree(s): OG0004729_tree ,
OG_05_0005056 (LandPlants) Phylogenetic Tree(s): OG_05_0005056_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c4_1180V3.1
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00097p00060630 evm_27.TU.AmTr_v1... Secondary metabolism.terpenoids.terpenoid... 0.03 Archaeplastida
Cre08.g358538 No alias Secondary metabolism.terpenoids.terpenoid... 0.03 Archaeplastida
Mp7g06410.1 No alias lycopene beta cyclase (LCY-b) 0.04 Archaeplastida
Solyc04g040190.1.1 No alias lycopene beta cyclase (LCY-b) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004109 coproporphyrinogen oxidase activity IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0051188 cofactor biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!