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  5. Pp3c4_12970V3.1

Pp3c4_12970V3.1


Description : auxin response factor 16


Gene families : OG0000080 (Archaeplastida) Phylogenetic Tree(s): OG0000080_tree ,
OG_05_0001322 (LandPlants) Phylogenetic Tree(s): OG_05_0001322_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c4_12970V3.1
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00267580 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.03 Archaeplastida
AMTR_s00021p00200760 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.02 Archaeplastida
AMTR_s00025p00198750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.03 Archaeplastida
AMTR_s00148p00046020 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.03 Archaeplastida
AMTR_s00155p00082980 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.03 Archaeplastida
AT1G59750 ARF1 auxin response factor 1 0.02 Archaeplastida
GSVIVT01008639001 No alias RNA biosynthesis.transcriptional activation.B3... 0.02 Archaeplastida
GSVIVT01023149001 No alias RNA biosynthesis.transcriptional activation.B3... 0.04 Archaeplastida
GSVIVT01037136001 No alias RNA biosynthesis.transcriptional activation.B3... 0.02 Archaeplastida
LOC_Os12g41950.1 No alias transcription factor (ARF) 0.05 Archaeplastida
MA_10432580g0010 No alias transcription factor (ARF) 0.02 Archaeplastida
MA_40335g0010 No alias transcription factor (ARF) 0.04 Archaeplastida
MA_85955g0010 No alias transcription factor (ARF) 0.02 Archaeplastida
Pp3c5_9420V3.1 No alias auxin response factor 2 0.03 Archaeplastida
Pp3c6_21370V3.1 No alias auxin response factor 2 0.04 Archaeplastida
Solyc06g075150.3.1 No alias transcription factor (ARF) 0.05 Archaeplastida
Zm00001e004554_P002 No alias transcription factor (ARF) 0.02 Archaeplastida
Zm00001e006640_P002 No alias transcription factor (ARF) 0.06 Archaeplastida
Zm00001e013639_P001 No alias transcription factor (ARF) 0.04 Archaeplastida
Zm00001e041866_P001 No alias transcription factor (ARF) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!