1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c4_13340V3.1

Pp3c4_13340V3.1


Description : No annotation


Gene families : OG0000163 (Archaeplastida) Phylogenetic Tree(s): OG0000163_tree ,
OG_05_0000066 (LandPlants) Phylogenetic Tree(s): OG_05_0000066_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c4_13340V3.1
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Pp3c11_21070V3.1 No alias VH1-interacting kinase 0.03 Archaeplastida
Pp3c11_22193V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c12_3820V3.1 No alias Protein kinase family protein 0.02 Archaeplastida
Pp3c13_2500V3.1 No alias Disease resistance protein (TIR-NBS-LRR class) 0.03 Archaeplastida
Pp3c14_1440V3.1 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.02 Archaeplastida
Pp3c16_21730V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c17_8727V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c17_8740V3.1 No alias Protein kinase family protein 0.03 Archaeplastida
Pp3c17_8750V3.1 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.03 Archaeplastida
Pp3c20_1301V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c20_21210V3.1 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Archaeplastida
Pp3c20_2990V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c21_14710V3.1 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Archaeplastida
Pp3c21_17700V3.1 No alias Protein kinase superfamily protein 0.03 Archaeplastida
Pp3c21_18290V3.1 No alias Protein kinase family protein 0.03 Archaeplastida
Pp3c21_6250V3.1 No alias Protein kinase family protein 0.03 Archaeplastida
Pp3c25_5920V3.1 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Archaeplastida
Pp3c2_13120V3.1 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Archaeplastida
Pp3c2_13130V3.1 No alias Protein kinase superfamily protein with... 0.02 Archaeplastida
Pp3c3_30860V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c3_30880V3.1 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Archaeplastida
Pp3c7_17410V3.1 No alias No annotation 0.03 Archaeplastida
Pp3c7_21000V3.1 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 Archaeplastida
Pp3c9_1940V3.1 No alias disease resistance protein (TIR-NBS-LRR class) 0.03 Archaeplastida
Pp3c9_24950V3.1 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.02 Archaeplastida
Pp3s1178_10V3.1 No alias No annotation 0.03 Archaeplastida
Pp3s203_50V3.1 No alias No annotation 0.02 Archaeplastida
Pp3s794_20V3.1 No alias transmembrane receptors;ATP binding 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0004866 endopeptidase inhibitor activity IEP Neighborhood
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0030414 peptidase inhibitor activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
MF GO:0061134 peptidase regulator activity IEP Neighborhood
MF GO:0061135 endopeptidase regulator activity IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!