Description : Tetratricopeptide repeat (TPR)-like superfamily protein
Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000000 (LandPlants) Phylogenetic Tree(s): OG_05_0000000_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Pp3c4_16600V3.1 | |
Cluster | HCCA: Cluster_290 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00003p00182540 | No alias | Pentatricopeptide repeat-containing protein At1g25360... | 0.03 | Archaeplastida | |
AMTR_s00008p00153950 | evm_27.TU.AmTr_v1... | RNA processing.organelle machineries.RNA... | 0.02 | Archaeplastida | |
AMTR_s00010p00220510 | evm_27.TU.AmTr_v1... | RNA processing.organelle machineries.RNA... | 0.02 | Archaeplastida | |
AMTR_s00010p00246970 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g39530... | 0.02 | Archaeplastida | |
AMTR_s00029p00235510 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein DOT4,... | 0.05 | Archaeplastida | |
AMTR_s00065p00033910 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g49740... | 0.02 | Archaeplastida | |
AMTR_s00081p00056740 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g08070,... | 0.02 | Archaeplastida | |
AMTR_s00098p00155650 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g39350... | 0.03 | Archaeplastida | |
AMTR_s00103p00160020 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | Archaeplastida | |
AT1G56570 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Archaeplastida | |
AT2G02750 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Archaeplastida | |
AT2G27610 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Archaeplastida | |
AT2G33760 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.05 | Archaeplastida | |
AT3G05240 | MEF19 | mitochondrial editing factor 19 | 0.03 | Archaeplastida | |
AT3G21470 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.03 | Archaeplastida | |
AT3G29230 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Archaeplastida | |
AT4G35130 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | Archaeplastida | |
AT4G39952 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Archaeplastida | |
AT5G06540 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Archaeplastida | |
AT5G27110 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Archaeplastida | |
AT5G40410 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | Archaeplastida | |
AT5G47460 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Archaeplastida | |
GSVIVT01037258001 | No alias | Pentatricopeptide repeat-containing protein At5g27110... | 0.03 | Archaeplastida | |
Gb_00195 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | Archaeplastida | |
Gb_00776 | No alias | Pentatricopeptide repeat-containing protein At5g50390,... | 0.02 | Archaeplastida | |
Gb_05554 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | Archaeplastida | |
Gb_07442 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.02 | Archaeplastida | |
Gb_09407 | No alias | Pentatricopeptide repeat-containing protein At4g33990... | 0.02 | Archaeplastida | |
Gb_11926 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | Archaeplastida | |
Gb_12556 | No alias | Pentatricopeptide repeat-containing protein At1g20230... | 0.02 | Archaeplastida | |
Gb_14324 | No alias | Pentatricopeptide repeat-containing protein DOT4,... | 0.02 | Archaeplastida | |
Gb_14966 | No alias | Pentatricopeptide repeat-containing protein At4g20770... | 0.02 | Archaeplastida | |
Gb_16448 | No alias | Pentatricopeptide repeat-containing protein At3g03580... | 0.02 | Archaeplastida | |
Gb_18745 | No alias | Pentatricopeptide repeat-containing protein At3g46790,... | 0.02 | Archaeplastida | |
Gb_21824 | No alias | Pentatricopeptide repeat-containing protein At3g12770... | 0.03 | Archaeplastida | |
Gb_23678 | No alias | Pentatricopeptide repeat-containing protein At3g46790,... | 0.02 | Archaeplastida | |
Gb_23924 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | Archaeplastida | |
Gb_25130 | No alias | Pentatricopeptide repeat-containing protein At3g49170,... | 0.02 | Archaeplastida | |
Gb_25737 | No alias | RNA editing factor (MEF1) | 0.03 | Archaeplastida | |
Gb_26571 | No alias | Pentatricopeptide repeat-containing protein At3g12770... | 0.03 | Archaeplastida | |
Gb_27381 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | Archaeplastida | |
Gb_28390 | No alias | Pentatricopeptide repeat-containing protein At3g12770... | 0.03 | Archaeplastida | |
Gb_28393 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | Archaeplastida | |
Gb_28902 | No alias | Pentatricopeptide repeat-containing protein At3g49170,... | 0.03 | Archaeplastida | |
Gb_30523 | No alias | Pentatricopeptide repeat-containing protein At3g03580... | 0.02 | Archaeplastida | |
Gb_31374 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.02 | Archaeplastida | |
Gb_32017 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.04 | Archaeplastida | |
Gb_33210 | No alias | RNA editing factor (OTP82) | 0.03 | Archaeplastida | |
Gb_37517 | No alias | RNA editing factor (OTP82) | 0.02 | Archaeplastida | |
Gb_37572 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.02 | Archaeplastida | |
Gb_38679 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | Archaeplastida | |
Gb_38680 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | Archaeplastida | |
Gb_39402 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | Archaeplastida | |
LOC_Os01g10090.1 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Archaeplastida | |
LOC_Os01g46230.1 | No alias | RNA editing factor (MEF1) | 0.02 | Archaeplastida | |
LOC_Os01g60430.1 | No alias | RNA editing factor (MEF10) | 0.03 | Archaeplastida | |
LOC_Os01g62910.1 | No alias | Pentatricopeptide repeat-containing protein At3g46790,... | 0.03 | Archaeplastida | |
LOC_Os02g01610.1 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Archaeplastida | |
LOC_Os03g04390.1 | No alias | Pentatricopeptide repeat-containing protein At4g35130,... | 0.02 | Archaeplastida | |
LOC_Os04g39410.1 | No alias | RNA editing factor (OTP86) | 0.02 | Archaeplastida | |
LOC_Os04g41120.1 | No alias | Pentatricopeptide repeat-containing protein At4g38010... | 0.03 | Archaeplastida | |
LOC_Os05g24150.1 | No alias | Pentatricopeptide repeat-containing protein At2g34400... | 0.03 | Archaeplastida | |
LOC_Os09g07780.1 | No alias | Pentatricopeptide repeat-containing protein At3g57430,... | 0.04 | Archaeplastida | |
LOC_Os12g13110.1 | No alias | Pentatricopeptide repeat-containing protein At2g22410,... | 0.03 | Archaeplastida | |
MA_10429540g0010 | No alias | Pentatricopeptide repeat-containing protein At4g14850... | 0.02 | Archaeplastida | |
MA_131g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | Archaeplastida | |
MA_16917g0010 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | Archaeplastida | |
MA_43615g0010 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | Archaeplastida | |
MA_96662g0010 | No alias | Pentatricopeptide repeat-containing protein At3g57430,... | 0.02 | Archaeplastida | |
Smo100621 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.02 | Archaeplastida | |
Smo107260 | No alias | Pentatricopeptide repeat-containing protein At4g14820... | 0.02 | Archaeplastida | |
Smo120613 | No alias | Pentatricopeptide repeat-containing protein At3g53360,... | 0.03 | Archaeplastida | |
Smo134463 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.04 | Archaeplastida | |
Smo407821 | No alias | No description available | 0.05 | Archaeplastida | |
Smo52548 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | Archaeplastida | |
Solyc03g096610.2.1 | No alias | Pentatricopeptide repeat-containing protein At1g33350... | 0.03 | Archaeplastida | |
Solyc04g016540.2.1 | No alias | Pentatricopeptide repeat-containing protein At2g39620... | 0.05 | Archaeplastida | |
Zm00001e000301_P001 | No alias | Pentatricopeptide repeat-containing protein At4g35130,... | 0.02 | Archaeplastida | |
Zm00001e001038_P001 | No alias | Pentatricopeptide repeat-containing protein At1g08070,... | 0.04 | Archaeplastida | |
Zm00001e003284_P001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Archaeplastida | |
Zm00001e004121_P001 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
Zm00001e007597_P001 | No alias | Pentatricopeptide repeat-containing protein At3g09040,... | 0.03 | Archaeplastida | |
Zm00001e010837_P001 | No alias | Pentatricopeptide repeat-containing protein At5g48910... | 0.03 | Archaeplastida | |
Zm00001e011923_P001 | No alias | Pentatricopeptide repeat-containing protein At4g21300... | 0.03 | Archaeplastida | |
Zm00001e012607_P002 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Archaeplastida | |
Zm00001e013211_P001 | No alias | Pentatricopeptide repeat-containing protein At5g48910... | 0.04 | Archaeplastida | |
Zm00001e013713_P001 | No alias | Pentatricopeptide repeat-containing protein At4g20770... | 0.03 | Archaeplastida | |
Zm00001e015727_P001 | No alias | Pentatricopeptide repeat-containing protein At5g66520... | 0.03 | Archaeplastida | |
Zm00001e016923_P001 | No alias | Pentatricopeptide repeat-containing protein At3g46790,... | 0.03 | Archaeplastida | |
Zm00001e023333_P001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Archaeplastida | |
Zm00001e029119_P001 | No alias | Pentatricopeptide repeat-containing protein At2g33760... | 0.04 | Archaeplastida | |
Zm00001e030553_P001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Archaeplastida | |
Zm00001e030831_P001 | No alias | Pentatricopeptide repeat-containing protein At3g20730... | 0.03 | Archaeplastida | |
Zm00001e030887_P001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Archaeplastida | |
Zm00001e031351_P001 | No alias | RNA editing factor (ECD1) | 0.03 | Archaeplastida | |
Zm00001e031396_P001 | No alias | Pentatricopeptide repeat-containing protein At1g20230... | 0.03 | Archaeplastida | |
Zm00001e034445_P001 | No alias | Pentatricopeptide repeat-containing protein At5g48910... | 0.02 | Archaeplastida | |
Zm00001e035764_P001 | No alias | Pentatricopeptide repeat-containing protein At2g34400... | 0.03 | Archaeplastida | |
Zm00001e041082_P001 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
MF | GO:0003674 | molecular_function | IEP | Neighborhood |
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
MF | GO:0005524 | ATP binding | IEP | Neighborhood |
MF | GO:0008144 | drug binding | IEP | Neighborhood |
MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
MF | GO:0043167 | ion binding | IEP | Neighborhood |
MF | GO:0043168 | anion binding | IEP | Neighborhood |
MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
No InterPro domains available for this sequence
No external refs found! |