1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c4_19180V3.1

Pp3c4_19180V3.1


Description : global transcription factor group E2


Gene families : OG0000250 (Archaeplastida) Phylogenetic Tree(s): OG0000250_tree ,
OG_05_0000330 (LandPlants) Phylogenetic Tree(s): OG_05_0000330_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c4_19180V3.1
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00136760 evm_27.TU.AmTr_v1... Transcription factor GTE4 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00046p00231370 evm_27.TU.AmTr_v1... Transcription factor GTE7 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT3G27260 GTE8 global transcription factor group E8 0.03 Archaeplastida
GSVIVT01001835001 No alias Transcription factor GTE8 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01008492001 No alias Transcription factor GTE10 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01020670001 No alias Transcription factor GTE4 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01021322001 No alias Transcription factor GTE9 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01038522001 No alias Transcription factor GTE7 OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os02g38980.1 No alias transcriptional co-activator (BET/GTE) 0.03 Archaeplastida
MA_10429630g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_87057g0010 No alias transcriptional co-activator (BET/GTE) 0.02 Archaeplastida
Pp3c12_15290V3.1 No alias bromodomain and extraterminal domain protein 10 0.05 Archaeplastida
Pp3c19_8020V3.1 No alias Transcription factor GTE6 0.02 Archaeplastida
Solyc01g106280.3.1 No alias transcriptional co-activator (BET/GTE) 0.04 Archaeplastida
Zm00001e006897_P002 No alias transcriptional co-activator (BET/GTE) 0.02 Archaeplastida
Zm00001e016462_P001 No alias transcriptional co-activator (BET/GTE) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR027353 NET_dom 418 479
IPR001487 Bromodomain 255 339
No external refs found!