Pp3c4_21630V3.1


Description : polygalacturonase 1


Gene families : OG0000327 (Archaeplastida) Phylogenetic Tree(s): OG0000327_tree ,
OG_05_0000147 (LandPlants) Phylogenetic Tree(s): OG_05_0000147_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c4_21630V3.1
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00173800 evm_27.TU.AmTr_v1... Cell wall.pectin.modification and... 0.02 Archaeplastida
AMTR_s00059p00088650 evm_27.TU.AmTr_v1... BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
AMTR_s00109p00021460 evm_27.TU.AmTr_v1... BURP domain protein RD22 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G23760 JP630, PG3 BURP domain-containing protein 0.04 Archaeplastida
AT1G60390 PG1 polygalacturonase 1 0.03 Archaeplastida
AT1G70370 PG2 polygalacturonase 2 0.03 Archaeplastida
AT5G25610 ATRD22, RD22 BURP domain-containing protein 0.05 Archaeplastida
GSVIVT01007771001 No alias Cell wall.pectin.modification and... 0.03 Archaeplastida
GSVIVT01035686001 No alias BURP domain protein RD22 OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01035702001 No alias BURP domain protein RD22 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_08843 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_18274 No alias non-catalytic polygalacturonase regulator 0.03 Archaeplastida
Gb_32942 No alias non-catalytic polygalacturonase regulator 0.03 Archaeplastida
Gb_32944 No alias Polygalacturonase 1 beta-like protein 3 OS=Arabidopsis... 0.02 Archaeplastida
Gb_32947 No alias non-catalytic polygalacturonase regulator 0.04 Archaeplastida
Gb_39304 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Gb_41422 No alias non-catalytic polygalacturonase regulator 0.02 Archaeplastida
LOC_Os05g12400.1 No alias BURP domain-containing protein 1 OS=Oryza sativa subsp.... 0.02 Archaeplastida
LOC_Os06g13240.1 No alias BURP domain-containing protein 9 OS=Oryza sativa subsp.... 0.04 Archaeplastida
LOC_Os06g19740.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os08g29200.1 No alias non-catalytic polygalacturonase regulator 0.04 Archaeplastida
MA_185806g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_250203g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_462957g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_63321g0010 No alias BURP domain protein RD22 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_7645347g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_8888577g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp6g16190.1 No alias BURP domain-containing protein 16 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Solyc02g062310.1.1 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.03 Archaeplastida
Solyc03g114240.4.1 No alias non-catalytic polygalacturonase regulator 0.02 Archaeplastida
Solyc05g005560.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e003182_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e003438_P003 No alias Protein RAFTIN 1A OS=Triticum aestivum... 0.04 Archaeplastida
Zm00001e019897_P001 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.04 Archaeplastida
Zm00001e029096_P002 No alias BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
BP GO:0000097 sulfur amino acid biosynthetic process IEP Neighborhood
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006555 methionine metabolic process IEP Neighborhood
MF GO:0008172 S-methyltransferase activity IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Neighborhood
BP GO:0009086 methionine biosynthetic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004873 BURP_dom 117 332
No external refs found!