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Description : polygalacturonase 1
Gene families : OG0000327 (Archaeplastida) Phylogenetic Tree(s): OG0000327_tree ,
OG_05_0000147 (LandPlants) Phylogenetic Tree(s): OG_05_0000147_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pp3c4_21630V3.1 | |
| Cluster | HCCA: Cluster_65 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00058p00173800 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and... | 0.02 | Archaeplastida | |
| AMTR_s00059p00088650 | evm_27.TU.AmTr_v1... | BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica | 0.02 | Archaeplastida | |
| AMTR_s00109p00021460 | evm_27.TU.AmTr_v1... | BURP domain protein RD22 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
| AT1G23760 | JP630, PG3 | BURP domain-containing protein | 0.04 | Archaeplastida | |
| AT1G60390 | PG1 | polygalacturonase 1 | 0.03 | Archaeplastida | |
| AT1G70370 | PG2 | polygalacturonase 2 | 0.03 | Archaeplastida | |
| AT5G25610 | ATRD22, RD22 | BURP domain-containing protein | 0.05 | Archaeplastida | |
| GSVIVT01007771001 | No alias | Cell wall.pectin.modification and... | 0.03 | Archaeplastida | |
| GSVIVT01035686001 | No alias | BURP domain protein RD22 OS=Arabidopsis thaliana | 0.01 | Archaeplastida | |
| GSVIVT01035702001 | No alias | BURP domain protein RD22 OS=Arabidopsis thaliana | 0.02 | Archaeplastida | |
| Gb_08843 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Gb_18274 | No alias | non-catalytic polygalacturonase regulator | 0.03 | Archaeplastida | |
| Gb_32942 | No alias | non-catalytic polygalacturonase regulator | 0.03 | Archaeplastida | |
| Gb_32944 | No alias | Polygalacturonase 1 beta-like protein 3 OS=Arabidopsis... | 0.02 | Archaeplastida | |
| Gb_32947 | No alias | non-catalytic polygalacturonase regulator | 0.04 | Archaeplastida | |
| Gb_39304 | No alias | BURP domain-containing protein 3 OS=Oryza sativa subsp.... | 0.02 | Archaeplastida | |
| Gb_41422 | No alias | non-catalytic polygalacturonase regulator | 0.02 | Archaeplastida | |
| LOC_Os05g12400.1 | No alias | BURP domain-containing protein 1 OS=Oryza sativa subsp.... | 0.02 | Archaeplastida | |
| LOC_Os06g13240.1 | No alias | BURP domain-containing protein 9 OS=Oryza sativa subsp.... | 0.04 | Archaeplastida | |
| LOC_Os06g19740.1 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| LOC_Os08g29200.1 | No alias | non-catalytic polygalacturonase regulator | 0.04 | Archaeplastida | |
| MA_185806g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| MA_250203g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| MA_462957g0010 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| MA_63321g0010 | No alias | BURP domain protein RD22 OS=Arabidopsis thaliana... | 0.05 | Archaeplastida | |
| MA_7645347g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| MA_8888577g0010 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
| Mp6g16190.1 | No alias | BURP domain-containing protein 16 OS=Oryza sativa subsp.... | 0.03 | Archaeplastida | |
| Solyc02g062310.1.1 | No alias | BURP domain-containing protein 3 OS=Oryza sativa subsp.... | 0.03 | Archaeplastida | |
| Solyc03g114240.4.1 | No alias | non-catalytic polygalacturonase regulator | 0.02 | Archaeplastida | |
| Solyc05g005560.4.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Zm00001e003182_P001 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Zm00001e003438_P003 | No alias | Protein RAFTIN 1A OS=Triticum aestivum... | 0.04 | Archaeplastida | |
| Zm00001e019897_P001 | No alias | BURP domain-containing protein 3 OS=Oryza sativa subsp.... | 0.04 | Archaeplastida | |
| Zm00001e029096_P002 | No alias | BURP domain-containing protein 3 OS=Oryza sativa subsp.... | 0.05 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000096 | sulfur amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0000097 | sulfur amino acid biosynthetic process | IEP | Neighborhood |
| MF | GO:0003871 | 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006555 | methionine metabolic process | IEP | Neighborhood |
| MF | GO:0008172 | S-methyltransferase activity | IEP | Neighborhood |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Neighborhood |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Neighborhood |
| BP | GO:0009086 | methionine biosynthetic process | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| MF | GO:0016717 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| MF | GO:0030599 | pectinesterase activity | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| MF | GO:0042085 | 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity | IEP | Neighborhood |
| BP | GO:0042545 | cell wall modification | IEP | Neighborhood |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0045229 | external encapsulating structure organization | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | Neighborhood |
| BP | GO:0071555 | cell wall organization | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004873 | BURP_dom | 117 | 332 |
| No external refs found! |