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  5. Pp3c4_22010V3.1

Pp3c4_22010V3.1


Description : Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain


Gene families : OG0001601 (Archaeplastida) Phylogenetic Tree(s): OG0001601_tree ,
OG_05_0003483 (LandPlants) Phylogenetic Tree(s): OG_05_0003483_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c4_22010V3.1
Cluster HCCA: Cluster_237

Target Alias Description ECC score Gene Family Method Actions
AT5G35910 No alias Polynucleotidyl transferase, ribonuclease H fold protein... 0.04 Archaeplastida
Cre12.g512250 No alias RNA processing.RNA decay.exosome complex.associated... 0.02 Archaeplastida
GSVIVT01029953001 No alias RNA processing.RNA decay.exosome complex.associated... 0.03 Archaeplastida
Gb_34925 No alias exoribonuclease (RRP6L) 0.02 Archaeplastida
LOC_Os07g32890.1 No alias exoribonuclease (RRP6L) 0.02 Archaeplastida
MA_721204g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
Mp3g07360.1 No alias exoribonuclease (RRP6L) 0.03 Archaeplastida
Mp7g12880.1 No alias exoribonuclease (RRP6L) 0.04 Archaeplastida
Smo84661 No alias RNA processing.RNA decay.exosome complex.associated... 0.02 Archaeplastida
Solyc10g018520.1.1 No alias exoribonuclease (RRP6L) 0.05 Archaeplastida
Zm00001e004727_P001 No alias exoribonuclease (RRP6L) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003724 RNA helicase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0008064 regulation of actin polymerization or depolymerization IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0030832 regulation of actin filament length IEP Neighborhood
BP GO:0030833 regulation of actin filament polymerization IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0032271 regulation of protein polymerization IEP Neighborhood
BP GO:0032535 regulation of cellular component size IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0032956 regulation of actin cytoskeleton organization IEP Neighborhood
BP GO:0032970 regulation of actin filament-based process IEP Neighborhood
BP GO:0033043 regulation of organelle organization IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0043254 regulation of protein complex assembly IEP Neighborhood
BP GO:0044087 regulation of cellular component biogenesis IEP Neighborhood
MF GO:0048365 Rac GTPase binding IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051493 regulation of cytoskeleton organization IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0090066 regulation of anatomical structure size IEP Neighborhood
BP GO:0110053 regulation of actin filament organization IEP Neighborhood
BP GO:1902903 regulation of supramolecular fiber organization IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!