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  5. Pp3c4_22160V3.1

Pp3c4_22160V3.1


Description : Histone superfamily protein


Gene families : OG0000170 (Archaeplastida) Phylogenetic Tree(s): OG0000170_tree ,
OG_05_0000135 (LandPlants) Phylogenetic Tree(s): OG_05_0000135_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c4_22160V3.1
Cluster HCCA: Cluster_252

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00271490 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H4-type histone 0.02 Archaeplastida
AMTR_s00019p00220160 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H4-type histone 0.03 Archaeplastida
AT2G28740 HIS4 histone H4 0.03 Archaeplastida
AT3G45930 No alias Histone superfamily protein 0.06 Archaeplastida
AT3G46320 No alias Histone superfamily protein 0.05 Archaeplastida
AT5G59690 No alias Histone superfamily protein 0.04 Archaeplastida
AT5G59970 No alias Histone superfamily protein 0.05 Archaeplastida
Cre06.g264600 No alias Chromatin organisation.histones.H4-type histone 0.02 Archaeplastida
Cre06.g265050 No alias Chromatin organisation.histones.H4-type histone 0.02 Archaeplastida
Cre06.g265200 No alias Chromatin organisation.histones.H4-type histone 0.01 Archaeplastida
Cre06.g265450 No alias Chromatin organisation.histones.H4-type histone 0.02 Archaeplastida
Cre06.g266600 No alias Chromatin organisation.histones.H4-type histone 0.02 Archaeplastida
Cre06.g268000 No alias Chromatin organisation.histones.H4-type histone 0.02 Archaeplastida
Cre06.g268400 No alias Chromatin organisation.histones.H4-type histone 0.01 Archaeplastida
Cre06.g271300 No alias Chromatin organisation.histones.H4-type histone 0.01 Archaeplastida
Cre06.g274150 No alias Chromatin organisation.histones.H4-type histone 0.01 Archaeplastida
Cre06.g274300 No alias Chromatin organisation.histones.H4-type histone 0.02 Archaeplastida
Cre06.g274900 No alias Chromatin organisation.histones.H4-type histone 0.02 Archaeplastida
Cre06.g275700 No alias Chromatin organisation.histones.H4-type histone 0.02 Archaeplastida
Cre06.g276650 No alias Chromatin organisation.histones.H4-type histone 0.02 Archaeplastida
Cre06.g276800 No alias Chromatin organisation.histones.H4-type histone 0.01 Archaeplastida
Cre12.g504600 No alias Chromatin organisation.histones.H4-type histone 0.02 Archaeplastida
Cre12.g504850 No alias Chromatin organisation.histones.H4-type histone 0.02 Archaeplastida
Cre12.g505450 No alias Chromatin organisation.histones.H4-type histone 0.02 Archaeplastida
Cre12.g506350 No alias Chromatin organisation.histones.H4-type histone 0.01 Archaeplastida
Cre12.g506450 No alias Chromatin organisation.histones.H4-type histone 0.02 Archaeplastida
Cre17.g708650 No alias Chromatin organisation.histones.H4-type histone 0.01 Archaeplastida
Cre17.g709100 No alias Chromatin organisation.histones.H4-type histone 0.01 Archaeplastida
GSVIVT01016577001 No alias Chromatin organisation.histones.H4-type histone 0.04 Archaeplastida
GSVIVT01016578001 No alias Chromatin organisation.histones.H4-type histone 0.02 Archaeplastida
GSVIVT01025005001 No alias Chromatin organisation.histones.H4-type histone 0.04 Archaeplastida
GSVIVT01032631001 No alias Chromatin organisation.histones.H4-type histone 0.03 Archaeplastida
Gb_10373 No alias histone (H4) 0.03 Archaeplastida
Gb_10374 No alias histone (H4) 0.02 Archaeplastida
Gb_15459 No alias histone (H4) 0.03 Archaeplastida
Gb_20453 No alias histone (H4) 0.02 Archaeplastida
Gb_21914 No alias histone (H4) 0.03 Archaeplastida
LOC_Os01g61920.1 No alias histone (H4) 0.02 Archaeplastida
LOC_Os03g02780.1 No alias histone (H4) 0.02 Archaeplastida
LOC_Os09g26340.1 No alias histone (H4) 0.02 Archaeplastida
LOC_Os09g38020.1 No alias histone (H4) 0.03 Archaeplastida
MA_116904g0010 No alias histone (H4) 0.02 Archaeplastida
MA_74102g0010 No alias histone (H4) 0.04 Archaeplastida
MA_9266178g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_97951g0010 No alias histone (H4) 0.02 Archaeplastida
Mp4g03080.1 No alias histone (H4) 0.02 Archaeplastida
Mp4g03090.1 No alias histone (H4) 0.02 Archaeplastida
Mp4g13430.1 No alias histone (H4) 0.02 Archaeplastida
Mp4g13440.1 No alias histone (H4) 0.02 Archaeplastida
Mp5g16840.1 No alias histone (H4) 0.03 Archaeplastida
Mp5g22460.1 No alias histone (H4) 0.04 Archaeplastida
Mp5g22470.1 No alias histone (H4) 0.04 Archaeplastida
Pp3c22_22190V3.1 No alias Histone superfamily protein 0.03 Archaeplastida
Smo150847 No alias Chromatin organisation.histones.H4-type histone 0.02 Archaeplastida
Smo167497 No alias Chromatin organisation.histones.H4-type histone 0.03 Archaeplastida
Smo233579 No alias Chromatin organisation.histones.H4-type histone 0.03 Archaeplastida
Solyc06g075830.2.1 No alias histone (H4) 0.03 Archaeplastida
Solyc06g075850.1.1 No alias histone (H4) 0.03 Archaeplastida
Solyc06g075930.1.1 No alias histone (H4) 0.03 Archaeplastida
Solyc11g072860.2.1 No alias histone (H4) 0.04 Archaeplastida
Zm00001e007138_P001 No alias histone (H4) 0.03 Archaeplastida
Zm00001e009859_P001 No alias histone (H4) 0.03 Archaeplastida
Zm00001e016816_P001 No alias histone (H4) 0.04 Archaeplastida
Zm00001e019368_P001 No alias histone (H4) 0.02 Archaeplastida
Zm00001e023245_P001 No alias histone (H4) 0.03 Archaeplastida
Zm00001e025845_P001 No alias histone (H4) 0.02 Archaeplastida
Zm00001e027269_P001 No alias histone (H4) 0.03 Archaeplastida
Zm00001e034229_P001 No alias histone (H4) 0.03 Archaeplastida
Zm00001e034230_P001 No alias histone (H4) 0.02 Archaeplastida
Zm00001e034964_P001 No alias histone (H4) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006275 regulation of DNA replication IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
MF GO:0019887 protein kinase regulator activity IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0051052 regulation of DNA metabolic process IEP Neighborhood
CC GO:0061617 MICOS complex IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR035425 CENP-T/H4_C 36 96
No external refs found!