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  5. Pp3c4_26780V3.1

Pp3c4_26780V3.1


Description : Argonaute family protein


Gene families : OG0000124 (Archaeplastida) Phylogenetic Tree(s): OG0000124_tree ,
OG_05_0001060 (LandPlants) Phylogenetic Tree(s): OG_05_0001060_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c4_26780V3.1
Cluster HCCA: Cluster_251

Target Alias Description ECC score Gene Family Method Actions
Pp3c9_18080V3.1 No alias Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.06 Archaeplastida
Smo98227 No alias Chromatin organisation.DNA methylation.canonical... 0.02 Archaeplastida
Smo99227 No alias Chromatin organisation.DNA methylation.canonical... 0.02 Archaeplastida
Solyc06g073530.3.1 No alias siRNA-integrating factor (AGO) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Neighborhood
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Neighborhood
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Neighborhood
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR003100 PAZ_dom 313 427
IPR032474 Argonaute_N 69 232
IPR032472 ArgoL2 437 481
IPR003165 Piwi 578 883
IPR014811 ArgoL1 244 291
No external refs found!