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  5. Pp3c4_27870V3.1

Pp3c4_27870V3.1


Description : ethylene responsive element binding factor 1


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0031748 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c4_27870V3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00249140 evm_27.TU.AmTr_v1... Cell wall.cutin and suberin.biosynthesis... 0.02 Archaeplastida
AMTR_s00026p00180130 evm_27.TU.AmTr_v1... Ethylene-responsive transcription factor ERF084... 0.01 Archaeplastida
AT1G06160 ORA59 octadecanoid-responsive Arabidopsis AP2/ERF 59 0.02 Archaeplastida
AT5G18560 PUCHI Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT5G25810 tny Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT5G43410 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
GSVIVT01008649001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01018271001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.01 Archaeplastida
GSVIVT01022277001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01036388001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.01 Archaeplastida
Gb_03782 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_03783 No alias transcription factor (ERF) 0.01 Archaeplastida
Gb_08781 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_16683 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_23321 No alias transcription factor (ERF) 0.01 Archaeplastida
Gb_25978 No alias Ethylene-responsive transcription factor ABI4... 0.02 Archaeplastida
Gb_26855 No alias transcription factor (DREB) 0.01 Archaeplastida
Gb_32532 No alias transcription factor (ERF) 0.01 Archaeplastida
Gb_34846 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_41020 No alias transcription factor (DREB) 0.01 Archaeplastida
Gb_41836 No alias transcription factor (ERF) 0.01 Archaeplastida
LOC_Os02g43820.1 No alias transcription factor (ERF) 0.01 Archaeplastida
LOC_Os04g46250.1 No alias transcription factor (ERF) 0.01 Archaeplastida
LOC_Os05g27930.1 No alias transcription factor (DREB) 0.02 Archaeplastida
LOC_Os06g07030.1 No alias transcription factor (DREB) 0.01 Archaeplastida
LOC_Os07g22730.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os08g35240.1 No alias Ethylene-responsive transcription factor ERF017... 0.03 Archaeplastida
LOC_Os08g45110.1 No alias transcription factor (DREB) 0.01 Archaeplastida
MA_10031781g0010 No alias transcription factor (ERF) 0.07 Archaeplastida
MA_168025g0010 No alias transcription factor (ERF) 0.01 Archaeplastida
MA_180106g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_27309g0010 No alias transcription factor (ERF) 0.01 Archaeplastida
MA_4481564g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_4929994g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_500288g0010 No alias transcription factor (DREB) 0.01 Archaeplastida
MA_5730259g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_8384767g0010 No alias transcription factor (DREB) 0.06 Archaeplastida
MA_844983g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_891091g0010 No alias Ethylene-responsive transcription factor 1A... 0.02 Archaeplastida
MA_938274g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_957g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_9786598g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
Pp3c20_3770V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c4_14760V3.1 No alias ethylene responsive element binding factor 2 0.06 Archaeplastida
Solyc03g116610.3.1 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.03 Archaeplastida
Solyc05g051200.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc11g006050.1.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e000400_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e003858_P001 No alias transcription factor (DREB) 0.01 Archaeplastida
Zm00001e007350_P001 No alias no hits & (original description: none) 0.01 Archaeplastida
Zm00001e015314_P001 No alias transcription factor (ERF) 0.01 Archaeplastida
Zm00001e019837_P001 No alias no hits & (original description: none) 0.01 Archaeplastida
Zm00001e021331_P001 No alias no hits & (original description: none) 0.01 Archaeplastida
Zm00001e022016_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e023759_P001 No alias Ethylene-responsive transcription factor ERF017... 0.02 Archaeplastida
Zm00001e031497_P001 No alias Ethylene-responsive transcription factor ABI4 OS=Oryza... 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006313 transposition, DNA-mediated IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0015074 DNA integration IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Neighborhood
BP GO:0032196 transposition IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!