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  5. Pp3c4_28130V3.1

Pp3c4_28130V3.1


Description : Glycosyl hydrolase superfamily protein


Gene families : OG0000315 (Archaeplastida) Phylogenetic Tree(s): OG0000315_tree ,
OG_05_0000179 (LandPlants) Phylogenetic Tree(s): OG_05_0000179_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c4_28130V3.1
Cluster HCCA: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00202020 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.heteromannan.modification and... 0.04 Archaeplastida
AT5G66460 AtMAN7, MAN7 Glycosyl hydrolase superfamily protein 0.04 Archaeplastida
Cre01.g048350 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.01 Archaeplastida
GSVIVT01037212001 No alias Cell wall.hemicellulose.heteromannan.modification and... 0.02 Archaeplastida
Gb_14560 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
Gb_28909 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
Gb_30579 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
MA_10433157g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10436185g0010 No alias Mannan endo-1,4-beta-mannosidase 2 OS=Arabidopsis... 0.02 Archaeplastida
MA_6558g0010 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
MA_71720g0010 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
MA_8194133g0010 No alias Mannan endo-1,4-beta-mannosidase 2 OS=Arabidopsis... 0.02 Archaeplastida
MA_953274g0010 No alias No annotation 0.03 Archaeplastida
Mp8g06310.1 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
Pp3c5_23790V3.1 No alias Glycosyl hydrolase superfamily protein 0.04 Archaeplastida
Solyc02g084990.3.1 No alias endo-beta-1,4-mannanase 0.04 Archaeplastida
Solyc07g053920.3.1 No alias endo-beta-1,4-mannanase 0.02 Archaeplastida
Zm00001e019799_P001 No alias No annotation 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0004055 argininosuccinate synthase activity IEP Neighborhood
MF GO:0005381 iron ion transmembrane transporter activity IEP Neighborhood
CC GO:0005887 integral component of plasma membrane IEP Neighborhood
BP GO:0006525 arginine metabolic process IEP Neighborhood
BP GO:0006526 arginine biosynthetic process IEP Neighborhood
BP GO:0006826 iron ion transport IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
BP GO:0009064 glutamine family amino acid metabolic process IEP Neighborhood
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
CC GO:0033573 high-affinity iron permease complex IEP Neighborhood
BP GO:0034755 iron ion transmembrane transport IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
CC GO:1902495 transmembrane transporter complex IEP Neighborhood
CC GO:1905862 ferroxidase complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
CC GO:1990351 transporter complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!