Pp3c4_28946V3.1

Description : cytochrome oxidase

Gene families : OG0002937 (Archaeplastida) Phylogenetic Tree(s): OG0002937_tree ,
OG_05_0002546 (LandPlants) Phylogenetic Tree(s): OG_05_0002546_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c4_28946V3.1
Cluster	HCCA: Cluster_9

Target	Alias	Description	ECC score	Gene Family Method
ATMG01360	COX1	cytochrome oxidase	0.05	Archaeplastida
GSVIVT01020676001	No alias	Cytochrome c oxidase subunit 1 OS=Glycine max	0.02	Archaeplastida
Gb_26267	No alias	Cytochrome c oxidase subunit 1 OS=Oenothera berteroana...	0.02	Archaeplastida
Gb_31333	No alias	component COX1 of cytochrome c oxidase complex	0.04	Archaeplastida
LOC_Os12g33946.1	No alias	component COX1 of cytochrome c oxidase complex	0.04	Archaeplastida
Solyc00g500186.1.1	No alias	component COX1 of cytochrome c oxidase complex	0.05	Archaeplastida
Solyc00g500250.1.1	No alias	component COX1 of cytochrome c oxidase complex	0.05	Archaeplastida
Solyc00g500349.1.1	No alias	component COX1 of cytochrome c oxidase complex	0.05	Archaeplastida
Solyc07g019510.4.1	No alias	component COX1 of cytochrome c oxidase complex	0.03	Archaeplastida
Solyc11g063610.3.1	No alias	Cytochrome c oxidase subunit 1 OS=Oenothera berteroana...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004129	cytochrome-c oxidase activity	IEA	Interproscan
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008324	cation transmembrane transporter activity	None	Extended
MF	GO:0009055	electron transfer activity	None	Extended
BP	GO:0009060	aerobic respiration	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015002	heme-copper terminal oxidase activity	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015077	monovalent inorganic cation transmembrane transporter activity	None	Extended
MF	GO:0015078	proton transmembrane transporter activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
BP	GO:0015980	energy derivation by oxidation of organic compounds	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016675	oxidoreductase activity, acting on a heme group of donors	None	Extended
MF	GO:0016676	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor	None	Extended
MF	GO:0020037	heme binding	IEA	Interproscan
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0045333	cellular respiration	None	Extended
MF	GO:0046906	tetrapyrrole binding	None	Extended
MF	GO:0048037	cofactor binding	None	Extended
BP	GO:0055114	oxidation-reduction process	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	Neighborhood
MF	GO:0003735	structural constituent of ribosome	IEP	Neighborhood
MF	GO:0003954	NADH dehydrogenase activity	IEP	Neighborhood
MF	GO:0005198	structural molecule activity	IEP	Neighborhood
CC	GO:0005840	ribosome	IEP	Neighborhood
BP	GO:0006412	translation	IEP	Neighborhood
BP	GO:0006518	peptide metabolic process	IEP	Neighborhood
MF	GO:0008137	NADH dehydrogenase (ubiquinone) activity	IEP	Neighborhood
CC	GO:0009579	thylakoid	IEP	Neighborhood
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	Neighborhood
MF	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	IEP	Neighborhood
BP	GO:0043043	peptide biosynthetic process	IEP	Neighborhood
CC	GO:0043228	non-membrane-bounded organelle	IEP	Neighborhood
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Neighborhood
BP	GO:0043603	cellular amide metabolic process	IEP	Neighborhood
BP	GO:0043604	amide biosynthetic process	IEP	Neighborhood
MF	GO:0050136	NADH dehydrogenase (quinone) activity	IEP	Neighborhood
CC	GO:1990904	ribonucleoprotein complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000883	Cyt_C_Oxase_1	1	193

External Links

No external refs found!

Pp3c4_28946V3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation