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  5. Pp3c4_30040V3.1

Pp3c4_30040V3.1


Description : SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING finger) protein-related


Gene families : OG0001855 (Archaeplastida) Phylogenetic Tree(s): OG0001855_tree ,
OG_05_0001955 (LandPlants) Phylogenetic Tree(s): OG_05_0001955_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c4_30040V3.1
Cluster HCCA: Cluster_232

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00224630 evm_27.TU.AmTr_v1... Probable E3 ubiquitin-protein ligase BAH1-like 1... 0.03 Archaeplastida
AT1G02860 NLA, BAH1 SPX (SYG1/Pho81/XPR1) domain-containing protein 0.03 Archaeplastida
Gb_40168 No alias Probable E3 ubiquitin-protein ligase BAH1-like... 0.03 Archaeplastida
MA_12120g0010 No alias Probable E3 ubiquitin-protein ligase BAH1-like 1... 0.02 Archaeplastida
Pp3c26_11740V3.1 No alias SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc... 0.03 Archaeplastida
Smo91888 No alias E3 ubiquitin-protein ligase BAH1 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc11g045230.2.1 No alias Probable E3 ubiquitin-protein ligase BAH1-like 1... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!