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  5. Pp3c4_3520V3.1

Pp3c4_3520V3.1


Description : Leucine-rich repeat (LRR) family protein


Gene families : OG0000279 (Archaeplastida) Phylogenetic Tree(s): OG0000279_tree ,
OG_05_0000206 (LandPlants) Phylogenetic Tree(s): OG_05_0000206_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c4_3520V3.1
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00231840 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 2... 0.02 Archaeplastida
AMTR_s00029p00242570 evm_27.TU.AmTr_v1... Pollen-specific leucine-rich repeat extensin-like... 0.03 Archaeplastida
AMTR_s00029p00242610 evm_27.TU.AmTr_v1... Pollen-specific leucine-rich repeat extensin-like... 0.02 Archaeplastida
AMTR_s00056p00176290 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 3... 0.03 Archaeplastida
AMTR_s00160p00027170 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
AT1G12040 LRX1 leucine-rich repeat/extensin 1 0.05 Archaeplastida
AT1G49490 No alias Leucine-rich repeat (LRR) family protein 0.1 Archaeplastida
AT2G15880 No alias Leucine-rich repeat (LRR) family protein 0.07 Archaeplastida
AT3G19020 No alias Leucine-rich repeat (LRR) family protein 0.08 Archaeplastida
AT3G19320 No alias Leucine-rich repeat (LRR) family protein 0.02 Archaeplastida
AT3G22800 No alias Leucine-rich repeat (LRR) family protein 0.02 Archaeplastida
AT4G13340 No alias Leucine-rich repeat (LRR) family protein 0.04 Archaeplastida
AT4G18670 No alias Leucine-rich repeat (LRR) family protein 0.02 Archaeplastida
AT4G28380 No alias Leucine-rich repeat (LRR) family protein 0.02 Archaeplastida
AT4G29240 No alias Leucine-rich repeat (LRR) family protein 0.02 Archaeplastida
AT4G33970 No alias Leucine-rich repeat (LRR) family protein 0.05 Archaeplastida
GSVIVT01020574001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 Archaeplastida
GSVIVT01031702001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01031843001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
Gb_10910 No alias LRR-domain extensin 0.03 Archaeplastida
Gb_26318 No alias LRR-domain extensin 0.03 Archaeplastida
LOC_Os01g25460.1 No alias LRR-domain extensin 0.05 Archaeplastida
LOC_Os01g41120.1 No alias LRR-domain extensin 0.04 Archaeplastida
LOC_Os02g40260.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os03g43650.1 No alias LRR-domain extensin 0.02 Archaeplastida
LOC_Os04g42620.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os04g57430.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.01 Archaeplastida
LOC_Os05g08770.2 No alias LRR-domain extensin 0.03 Archaeplastida
LOC_Os05g09640.1 No alias Leucine-rich repeat extensin-like protein 4... 0.05 Archaeplastida
LOC_Os06g49100.1 No alias LRR-domain extensin 0.02 Archaeplastida
LOC_Os07g07990.1 No alias LRR-domain extensin 0.02 Archaeplastida
LOC_Os12g35710.1 No alias LRR-domain extensin 0.04 Archaeplastida
MA_100985g0010 No alias LRR-domain extensin 0.02 Archaeplastida
MA_5516756g0010 No alias LRR-domain extensin 0.02 Archaeplastida
MA_7188g0010 No alias LRR-domain extensin 0.02 Archaeplastida
Mp8g04500.1 No alias Leucine-rich repeat extensin-like protein 1... 0.04 Archaeplastida
Smo412903 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 Archaeplastida
Smo81544 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.05 Archaeplastida
Solyc01g107790.2.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 Archaeplastida
Solyc01g108900.4.1 No alias LRR-domain extensin 0.02 Archaeplastida
Solyc02g064940.1.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.02 Archaeplastida
Solyc07g053840.1.1 No alias LRR-domain extensin 0.03 Archaeplastida
Solyc10g050110.1.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 Archaeplastida
Solyc12g006980.2.1 No alias LRR-domain extensin 0.02 Archaeplastida
Solyc12g088950.3.1 No alias Pollen-specific leucine-rich repeat extensin-like... 0.03 Archaeplastida
Zm00001e005974_P001 No alias LRR-domain extensin 0.04 Archaeplastida
Zm00001e011874_P001 No alias LRR-domain extensin 0.03 Archaeplastida
Zm00001e026840_P001 No alias LRR-domain extensin 0.02 Archaeplastida
Zm00001e031241_P001 No alias LRR-domain extensin 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004019 adenylosuccinate synthase activity IEP Neighborhood
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!