Pp3c4_6000V3.1


Description : squamosa promoter binding protein-like 8


Gene families : OG0000102 (Archaeplastida) Phylogenetic Tree(s): OG0000102_tree ,
OG_05_0000092 (LandPlants) Phylogenetic Tree(s): OG_05_0000092_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c4_6000V3.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00150040 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
AMTR_s00047p00197010 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.04 Archaeplastida
AMTR_s00106p00142470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.05 Archaeplastida
AMTR_s00106p00142740 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00106p00144050 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.04 Archaeplastida
AT1G02065 SPL8 squamosa promoter binding protein-like 8 0.02 Archaeplastida
AT1G27370 SPL10 squamosa promoter binding protein-like 10 0.03 Archaeplastida
AT1G76580 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.02 Archaeplastida
AT2G42200 AtSPL9, SPL9 squamosa promoter binding protein-like 9 0.02 Archaeplastida
AT3G60030 SPL12 squamosa promoter-binding protein-like 12 0.04 Archaeplastida
Cre10.g433350 No alias RNA biosynthesis.transcriptional activation.SBP... 0.01 Archaeplastida
GSVIVT01008556001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
GSVIVT01014302001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
GSVIVT01018205001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
GSVIVT01021087001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
GSVIVT01028208001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
GSVIVT01033519001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.04 Archaeplastida
Gb_00228 No alias transcription factor (SBP) 0.02 Archaeplastida
Gb_22010 No alias transcription factor (SBP) 0.05 Archaeplastida
Gb_26600 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_27198 No alias transcription factor (SBP) 0.03 Archaeplastida
Gb_37539 No alias transcription factor (SBP) 0.04 Archaeplastida
Gb_38013 No alias transcription factor (SBP) 0.02 Archaeplastida
Gb_38014 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os02g04680.1 No alias transcription factor (SBP) 0.02 Archaeplastida
LOC_Os02g08070.1 No alias transcription factor (SBP) 0.02 Archaeplastida
LOC_Os06g44860.1 No alias transcription factor (SBP) 0.02 Archaeplastida
LOC_Os07g32170.1 No alias transcription factor (SBP) 0.04 Archaeplastida
LOC_Os08g41940.1 No alias transcription factor (SBP) 0.02 Archaeplastida
LOC_Os09g32944.1 No alias transcription factor (SBP) 0.06 Archaeplastida
MA_16835g0010 No alias Squamosa promoter-binding-like protein 1 OS=Arabidopsis... 0.02 Archaeplastida
MA_3179g0020 No alias transcription factor (SBP) 0.02 Archaeplastida
MA_7789506g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp1g10020.1 No alias transcription factor (SBP) 0.02 Archaeplastida
Mp1g10030.1 No alias transcription factor (SBP) 0.02 Archaeplastida
Pp3c12_24350V3.1 No alias squamosa promoter binding protein-like 8 0.03 Archaeplastida
Pp3c16_7480V3.1 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.02 Archaeplastida
Pp3c16_7490V3.1 No alias squamosa promoter binding protein-like 2 0.02 Archaeplastida
Pp3c16_7540V3.1 No alias squamosa promoter binding protein-like 8 0.04 Archaeplastida
Pp3c25_8630V3.1 No alias squamosa promoter binding protein-like 2 0.04 Archaeplastida
Pp3c5_22750V3.1 No alias squamosa promoter binding protein-like 8 0.07 Archaeplastida
Pp3c6_6900V3.1 No alias squamosa promoter binding protein-like 8 0.05 Archaeplastida
Solyc05g015840.3.1 No alias transcription factor (SBP) 0.02 Archaeplastida
Solyc07g062980.4.1 No alias transcription factor (SBP) 0.03 Archaeplastida
Solyc10g009080.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc10g018780.3.1 No alias transcription factor (SBP) 0.02 Archaeplastida
Zm00001e009093_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e013198_P001 No alias transcription factor (SBP) 0.02 Archaeplastida
Zm00001e018817_P003 No alias transcription factor (SBP) 0.02 Archaeplastida
Zm00001e021425_P001 No alias transcription factor (SBP) 0.04 Archaeplastida
Zm00001e028442_P002 No alias transcription factor (SBP) 0.04 Archaeplastida
Zm00001e041526_P001 No alias transcription factor (SBP) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!