1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c4_6722V3.1

Pp3c4_6722V3.1


Description : ubiquitin family protein


Gene families : OG0001786 (Archaeplastida) Phylogenetic Tree(s): OG0001786_tree ,
OG_05_0002762 (LandPlants) Phylogenetic Tree(s): OG_05_0002762_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c4_6722V3.1
Cluster HCCA: Cluster_263

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00026840 evm_27.TU.AmTr_v1... Ubiquitin domain-containing protein DSK2a OS=Arabidopsis thaliana 0.02 Archaeplastida
AT2G17190 No alias ubiquitin family protein 0.03 Archaeplastida
AT2G17200 DSK2 ubiquitin family protein 0.02 Archaeplastida
GSVIVT01003842001 No alias Ubiquitin domain-containing protein DSK2b OS=Arabidopsis thaliana 0.06 Archaeplastida
MA_39935g0010 No alias autophagic adaptor protein (DSK2) 0.03 Archaeplastida
Mp1g23030.1 No alias autophagic adaptor protein (DSK2) 0.02 Archaeplastida
Smo171198 No alias Ubiquitin domain-containing protein DSK2a OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc02g082800.3.1 No alias autophagic adaptor protein (DSK2) 0.04 Archaeplastida
Solyc03g032160.3.1 No alias autophagic adaptor protein (DSK2) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030118 clathrin coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030125 clathrin vesicle coat IEP Neighborhood
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Neighborhood
CC GO:0030132 clathrin coat of coated pit IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
MF GO:0060090 molecular adaptor activity IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!